RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 MMP12P39900 470 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 MAGEA12P43365 314 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 CCT5P48643 541 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 CBX1P83916 185 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 XIAPP98170 497 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 POU4F1Q01851 419 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 PTSQ03393 145 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 PEX6Q13608 980 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 GPR33Q49SQ1 333 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 ZRANB3Q5FWF4 1079 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 SH2D5Q6ZV89 423 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 ERN2Q76MJ5 926 aaKnown RBP24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 SNX20Q7Z614 316 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 MMAAQ8IVH4 418 aaKnown RBP24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 DTX3LQ8TDB6 740 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 TSPAN17Q96FV3 270 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 ATXN7L3BQ96GX2 97 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 DUSP12Q9UNI6 340 aa24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 MTO1Q9Y2Z2 717 aaKnown RBP24.49■■□□□ 1.51
ECHDC3-201ENST00000379215 FAM95CA0A1B0GW59 222 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 NDUFS3O75489 264 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 SRP72O76094 671 aaKnown RBP24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 PRAMEF1O95521 474 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 IL9P15248 144 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 BPIP17213 487 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 PSMD8P48556 350 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 GYS2P54840 703 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 SLC12A2P55011 1212 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 DCDC1P59894 354 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 SEPT7Q16181 437 aaKnown RBP24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 SLC44A4Q53GD3 710 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 CCDC91Q7Z6B0 441 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 OR2T3Q8NH03 318 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 FAM3CQ92520 227 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 ARRDC3Q96B67 414 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 SNX15Q9NRS6 342 aa24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 INTS9Q9NV88 658 aaKnown RBP24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 NFKBIL1Q9UBC1 381 aaPredicted RBP24.48■■□□□ 1.51
ECHDC3-201ENST00000379215 NARSO43776 548 aaKnown RBP24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 HAUS5O94927 633 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 CHRM1P11229 460 aaPredicted RBP24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 BMP1P13497 986 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 ADRB3P13945 408 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 CHN1P15882 459 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 MDH1P40925 334 aaKnown RBP24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 SPINT3P49223 89 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 USP10Q14694 798 aaKnown RBP24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 ZNF776Q68DI1 518 aaPredicted RBP24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 LCA5Q86VQ0 697 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 CENPTQ96BT3 561 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 IL26Q9NPH9 171 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 SLC39A10Q9ULF5 831 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 XIRP2A4UGR9 3374 aa24.47■■□□□ 1.51
ECHDC3-201ENST00000379215 A8MX80 341 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 GOLGA8RI6L899 631 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 RRP9O43818 475 aaKnown RBP24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 SPAG7O75391 227 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 C1SP09871 688 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 C5AR1P21730 350 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 CRABP2P29373 138 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 ITGA9Q13797 1035 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 POM121L1PQ3SYA9 428 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 TAF1BQ53T94 588 aaPredicted RBP24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 C2orf27AQ580R0 203 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 FAM45BPQ6NSW5 357 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 FAM151BQ6UXP7 276 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 ADHFE1Q8IWW8 467 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 GPATCH11Q8N954 259 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 IL17RCQ8NAC3 791 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 FAM45AQ8TCE6 357 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 KLF6Q99612 283 aaPredicted RBP24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 CAPS2Q9BXY5 557 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 ZDHHC4Q9NPG8 344 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 PCMTD2Q9NV79 361 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 ANKRD6Q9Y2G4 727 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 COMMD10Q9Y6G5 202 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 ELFN1P0C7U0 828 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 STMN1P16949 149 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 CRHR1P34998 444 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 WASP42768 502 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 SATB1Q01826 763 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 RALGDSQ12967 914 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 NFATC2Q13469 925 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 CST6Q15828 149 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 LRRC73Q5JTD7 316 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 CNSTQ6PJW8 725 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 ULK4Q96C45 1275 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 ELMO2Q96JJ3 720 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 CCDC68Q9H2F9 335 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 ASB8Q9H765 288 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 DCDC2Q9UHG0 476 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 TLK1Q9UKI8 766 aa24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 FNDC3AQ9Y2H6 1198 aaKnown RBP24.46■■□□□ 1.51
ECHDC3-201ENST00000379215 A0A0U1RQS6 177 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 AREL1O15033 823 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 GLRA3O75311 464 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 GSTA1P08263 222 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 HOXB2P14652 356 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 PTGER3P43115 390 aa24.45■■□□□ 1.5
ECHDC3-201ENST00000379215 ADARP55265 1226 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms