RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RELNP78509 3460 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 NPIPB15A6NHN6 443 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 TMCO5BA8MYB1 307 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 B4E171 279 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 MAP3K6O95382 1288 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 OAS2P29728 719 aaKnown RBP17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 TSPAN7P41732 249 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 MAXP61244 160 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 NSUN2Q08J23 767 aaKnown RBP eCLIP17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 PEX6Q13608 980 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 RFTN1Q14699 578 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 TMEM71Q6P5X7 295 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 RFLNAQ6ZTI6 216 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 SLC37A2Q8TED4 501 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 STARD8Q92502 1023 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 RTP4Q96DX8 246 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 ABHD17AQ96GS6 310 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 AGPAT1Q99943 283 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 APMAPQ9HDC9 416 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 PILRAQ9UKJ1 303 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 SLC17A4Q9Y2C5 497 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 MAN2B2Q9Y2E5 1009 aa17.71■□□□□ 0.43
PDLIM4-202ENST00000379018 BLACEA4D250 179 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 IVLP07476 585 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 NR1D1P20393 614 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 TRAF2Q12933 501 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 NFATC2Q13469 925 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 LACTB2Q53H82 288 aaPredicted RBP17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 PPP1R15BQ5SWA1 713 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 ERMARDQ5T6L9 678 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 MCOLN2Q8IZK6 566 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 NEK11Q8NG66 645 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 NCSTNQ92542 709 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 PSKH2Q96QS6 385 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 DPYSL5Q9BPU6 564 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 NOD2Q9HC29 1040 aa17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 MRPS18BQ9Y676 258 aaKnown RBP17.7■□□□□ 0.42
PDLIM4-202ENST00000379018 INPP4BO15327 924 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 CAPN5O15484 640 aaPredicted RBP17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 HTRA2O43464 458 aaPredicted RBP17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 ASMTLO95671 621 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 NFKBIAP25963 317 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 MAP4P27816 1152 aaKnown RBP17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 NOP2P46087 812 aaKnown RBP17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 GPLD1P80108 840 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 HIST2H2BCQ6DN03 193 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 CEACAM20Q6UY09 585 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 TIPARPQ7Z3E1 657 aaKnown RBP17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 GALNT13Q8IUC8 556 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 PGBD5Q8N414 524 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 FAM26EQ8N5C1 309 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 BMPERQ8N8U9 685 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 APOBEC4Q8WW27 367 aaKnown RBP17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 TEFMQ96QE5 360 aaKnown RBP17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 SMIM14Q96QK8 99 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 KCTD5Q9NXV2 234 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 TAS2R14Q9NYV8 317 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 PHTF1Q9UMS5 762 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 TP53TG5Q9Y2B4 290 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 SIK3Q9Y2K2 1263 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 PRKAB1Q9Y478 270 aa17.69■□□□□ 0.42
PDLIM4-202ENST00000379018 PRR19A6NJB7 356 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 MTSS1O43312 755 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 PRPSAP2O60256 369 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 SOCS5O75159 536 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 STK17BO94768 372 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 EML2O95834 649 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 TCN2P20062 427 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 MAN1A1P33908 653 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 HHEXQ03014 270 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 SPTAN1Q13813 2472 aaKnown RBP17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 SEPT6Q14141 434 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 ACAD10Q6JQN1 1059 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 USP45Q70EL2 814 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 SCAMP4Q969E2 229 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 AP2M1Q96CW1 435 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 NUDCD1Q96RS6 583 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 EFHD1Q9BUP0 239 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 NUP62CLQ9H1M0 184 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 ZNHIT2Q9UHR6 403 aa17.68■□□□□ 0.42
PDLIM4-202ENST00000379018 MIPP30301 263 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 MLLT10P55197 1068 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 MC2RQ01718 297 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 MAMLD1Q13495 774 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 C4orf17Q53FE4 359 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 PYCR3Q53H96 274 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 ARMC12Q5T9G4 340 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 LRRC66Q68CR7 880 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 ARFGAP1Q8N6T3 406 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 AGAP2Q99490 1192 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 ABCG8Q9H221 673 aa17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 CWC15Q9P013 229 aaKnown RBP17.67■□□□□ 0.42
PDLIM4-202ENST00000379018 USP9YO00507 2555 aaPredicted RBP17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 A0A1W2PQ67 120 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 EIF3CLB5ME19 914 aaKnown RBP17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 SNX2O60749 519 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 RNF8O76064 485 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 PGLSO95336 258 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms