RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 HGFP14210 728 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 USP46P62068 366 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 CPSF6Q16630 551 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 KLHL23Q8NBE8 558 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 POF1BQ8WVV4 589 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 MYOCQ99972 504 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 RAD18Q9NS91 495 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 SH3BP4Q9P0V3 963 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 A0A0D9SEW6 157 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 CPSF4O95639 269 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 ZNF33AQ06730 810 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 LRRC73Q5JTD7 316 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 ARMC6Q6NXE6 501 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 OLFM3Q96PB7 478 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 TRMOQ9BU70 441 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 CDH19Q9H159 772 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 PHF24Q9UPV7 400 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 NCKAP1Q9Y2A7 1128 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 COL4A5P29400 1685 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 TAF1LQ8IZX4 1826 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 ULK1O75385 1050 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 CDK14O94921 469 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 SERPINA6P08185 405 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 ME2P23368 584 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 GRK3P35626 688 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 SPAM1P38567 509 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 PRIM2P49643 509 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 GSCP56915 257 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 PLCL1Q15111 1095 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 PRKD1Q15139 912 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 LYPLAL1Q5VWZ2 237 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM171BQ6P995 826 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 LRRC74BQ6ZQY2 392 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 GPRIN3Q6ZVF9 776 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 CUZD1Q86UP6 607 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 TAGAPQ8N103 731 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 DCBLD1Q8N8Z6 715 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 KLHDC9Q8NEP7 349 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 HEXDCQ8WVB3 486 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 PYDC1Q8WXC3 89 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 C7orf26Q96N11 449 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 CCDC90BQ9GZT6 254 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM32AQ9Y421 112 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 CDK5RAP2Q96SN8 1893 aa14.16□□□□□ -0.14
SHROOM1-203ENST00000378679 MYO1GB0I1T2 1018 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 ALOX15P16050 662 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 PSMA4P25789 261 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 ACSM2AQ08AH3 577 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 SCAPQ12770 1279 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 SIRPB2Q5JXA9 342 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 VWA5B1Q5TIE3 1220 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM46CQ5VWP2 391 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 ACSM2BQ68CK6 577 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 ALKAL1Q6UXT8 129 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC44A2Q8IWA5 706 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC22A17Q8WUG5 538 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 IGSF8Q969P0 613 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 CDKN2AIPNLQ96HQ2 116 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 KLHL32Q96NJ5 620 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 TCF12Q99081 682 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM83DQ9H4H8 585 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 RMND5AQ9H871 391 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 TMEM248Q9NWD8 314 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 KPNA5O15131 536 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 TEX28O15482 410 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 EPHX1P07099 455 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 DGKGP49619 791 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 CAP1Q01518 475 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 WASHC2DQ5SRD0 308 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 FBXO46Q6PJ61 603 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 NPWQ8N729 165 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 C1orf74Q96LT6 269 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 TSGA13Q96PP4 275 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 SMG9Q9H0W8 520 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 TDP1Q9NUW8 608 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 PHIPQ8WWQ0 1821 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 ZNF840PA6NDX5 716 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 TRAFD1O14545 582 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 RGS14O43566 566 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 MAGEC1O60732 1142 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 FKBP6O75344 327 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 DPYSQ14117 519 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 CYP51A1Q16850 503 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 KCTD21Q4G0X4 260 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 KIAA1324Q6UXG2 1013 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 RRM2BQ7LG56 351 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 RELL1Q8IUW5 271 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 CENPIQ92674 756 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 WARS2Q9UGM6 360 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 PCDHB1Q9Y5F3 818 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 PSAT1Q9Y617 370 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 F5P12259 2224 aa14.15□□□□□ -0.14
SHROOM1-203ENST00000378679 SSC5DA1L4H1 1573 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 NEMP2A6NFY4 417 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 AHSGP02765 367 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 FTH1P02794 183 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 PABPC1P11940 636 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 COX4I1P13073 169 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms