RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PFDN1O60925 122 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 GOT2P00505 430 aaKnown RBP13.2□□□□□ -0.3
ACTN1-202ENST00000376839 PIRTP0C851 137 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 SLC2A3P11169 496 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 HSD17B1P14061 328 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 HGFP14210 728 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 SLC26A3P40879 764 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 DIO3P55073 304 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 KCTD21Q4G0X4 260 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 INTS11Q5TA45 600 aaKnown RBP13.2□□□□□ -0.3
ACTN1-202ENST00000376839 KANK2Q63ZY3 851 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 LCN8Q6JVE9 175 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 TTC33Q6PID6 262 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-202ENST00000376839 NLRC5Q86WI3 1866 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 CAMK1DQ8IU85 385 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 AQP12AQ8IXF9 295 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 LRRC58Q96CX6 371 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 MAGEB3O15480 346 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 CYP11A1P05108 521 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 FGF4P08620 206 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 ZNF37AP17032 561 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-202ENST00000376839 MYF6P23409 242 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 MERTKQ12866 999 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 INPP5AQ14642 412 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 USP50Q70EL3 339 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-202ENST00000376839 IFNEQ86WN2 208 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 LRRC49Q8IUZ0 686 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 CPNE9Q8IYJ1 553 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 ZNF683Q8IZ20 524 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 UMODL1-AS1Q8N2C9 162 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 ARRDC2Q8TBH0 407 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 TEX37Q96LM6 180 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 PTPN18Q99952 460 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 SP110Q9HB58 689 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 SLC52A3Q9NQ40 469 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 SDR39U1Q9NRG7 319 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-202ENST00000376839 CDC14AQ9UNH5 594 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 RNF103-CHMP3A0A140T963 221 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 CCDC162PA2VCL2 907 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 MYADML2A6NDP7 307 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 CHRNA1P02708 482 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 PSMA4P25789 261 aaKnown RBP13.19□□□□□ -0.3
ACTN1-202ENST00000376839 PURAQ00577 322 aaKnown RBP13.19□□□□□ -0.3
ACTN1-202ENST00000376839 ATP6AP1Q15904 470 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 RABL3Q5HYI8 236 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 GPR141Q7Z602 305 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 ANKRD23Q86SG2 305 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-202ENST00000376839 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 OFCC1Q8IZS5 231 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 PACRGLQ8N7B6 248 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 OR13C4Q8NGS5 318 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 BLOC1S5Q8TDH9 187 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 VPS33AQ96AX1 596 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 ISOC1Q96CN7 298 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 HSPBAP1Q96EW2 488 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 MYRFLQ96LU7 910 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 TRIM15Q9C019 465 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 PRDM5Q9NQX1 630 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-202ENST00000376839 ACTR3BQ9P1U1 418 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 CIDEBQ9UHD4 219 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 IKZF3Q9UKT9 509 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 TRPV2Q9Y5S1 764 aa13.19□□□□□ -0.3
ACTN1-202ENST00000376839 A0A087WXM4 84 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 TRIM64CA6NLI5 447 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 M0QZ92 97 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 ACOX3O15254 700 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 MGEA5O60502 916 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 MT-ND1P03886 318 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 GFAPP14136 432 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 NCK1P16333 377 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 IL10P22301 178 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 CES1P23141 567 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 FASP25445 335 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 CCT8P50990 548 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 SLC36A3Q495N2 470 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 KLHL35Q6PF15 583 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 SPATA2LQ8IUW3 424 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 DNAJB14Q8TBM8 379 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 ZC3H15Q8WU90 426 aaKnown RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 CYGBQ8WWM9 190 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 FEM1CQ96JP0 617 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 DCUN1D5Q9BTE7 237 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 AP5M1Q9H0R1 490 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 SOX17Q9H6I2 414 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 TIMM22Q9Y584 194 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 PCDHA9Q9Y5H5 950 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 PATJQ8NI35 1801 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 ASPDHA6ND91 283 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 EI24O14681 340 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 INPP4BO15327 924 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms