RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 LYNP07948 512 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 AKT2P31751 481 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 C12orf56Q8IXR9 622 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 ZFP28Q8NHY6 868 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 AUTS2Q8WXX7 1259 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 ACAT2Q9BWD1 397 aa14.31□□□□□ -0.12
TRAF1-201ENST00000373887 A0A0G2JLL6 359 aaPredicted RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 STBD1O95210 358 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 SLC25A14O95258 325 aaPredicted RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 TRAP1Q12931 704 aaKnown RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 PRRT2Q7Z6L0 340 aaPredicted RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 FBXL16Q8N461 479 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 MEIOBQ8N635 442 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 DPEP3Q9H4B8 488 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 TNPO3Q9Y5L0 923 aaKnown RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 CATP04040 527 aaKnown RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 AP1S2P56377 157 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 PSME3P61289 254 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 CBX3Q13185 183 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 IL18Q14116 193 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 ANKS1BQ7Z6G8 1248 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 CDYL2Q8N8U2 506 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 VANGL1Q8TAA9 524 aaPredicted RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 FCRL4Q96PJ5 515 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 SPAG4Q9NPE6 437 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 TBC1D30Q9Y2I9 924 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 TSPAN1O60635 241 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 CCND3P30281 292 aaPredicted RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 ZNF248Q8NDW4 579 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 STAG3L4Q8TBR4 150 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 HTRA1Q92743 480 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 GPER1Q99527 375 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 FGFBP2Q9BYJ0 223 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 PRRG4Q9BZD6 226 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 IMP3Q9NV31 184 aaKnown RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 ZMYM2Q9UBW7 1377 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 CASKO14936 926 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 EPHB6O15197 1021 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 SHBGP04278 402 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 CBX5P45973 191 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 DEPDC4Q8N2C3 294 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 STK40Q8N2I9 435 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 TOP6BLQ8N6T0 577 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 AGAP11Q8TF27 550 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 SUCOQ9UBS9 1254 aaKnown RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 EGFL7Q9UHF1 273 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 OR6C75A6NL08 312 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 ZNF613Q6PF04 617 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.3□□□□□ -0.12
TRAF1-201ENST00000373887 CHST9Q7L1S5 443 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 OR14C36Q8NHC7 312 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 AP3S1Q92572 193 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 GAL3ST3Q96A11 431 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 HSD17B14Q9BPX1 270 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 SPATA5L1Q9BVQ7 753 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 IRAK3Q9Y616 596 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 PMF1-BGLAPU3KQ54 211 aa14.3□□□□□ -0.12
TRAF1-201ENST00000373887 MAGEB3O15480 346 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ITGA2P17301 1181 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 UBXN2BQ14CS0 331 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 NEPROQ6NW34 567 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 GALNT5Q7Z7M9 940 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ALLCQ8N6M5 410 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 HSFY1Q96LI6 401 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 PDZD7Q9H5P4 517 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 LEF1Q9UJU2 399 aaPredicted RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 RICTORQ6R327 1708 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 LOC110117498-PIK3R3F6TDL0 507 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 PAPSS1O43252 624 aaPredicted RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ANPEPP15144 967 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 PTDSS1P48651 473 aaKnown RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 FAM46CQ5VWP2 391 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 FUT10Q6P4F1 479 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ZCCHC9Q8N567 271 aaKnown RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ZNF563Q8TA94 476 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 KCTD4Q8WVF5 259 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 C11orf49Q9H6J7 331 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 CARNS1A5YM72 827 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 NFKBIEO00221 500 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 NAGLUP54802 743 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 NAB1Q13506 487 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 AKAP14Q86UN6 197 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ZNF557Q8N988 423 aaPredicted RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 DUS2Q9NX74 493 aaKnown RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ARHGEF33A8MVX0 844 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 PGRMC2O15173 223 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 FFAR2O15552 330 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 PCBP1Q15365 356 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 CARTPTQ16568 116 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 PCID2Q5JVF3 399 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 WRAP53Q9BUR4 548 aaKnown RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 LMAN2LQ9H0V9 348 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 EVA1BQ9NVM1 165 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 A0A075B6Q4 140 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 A0A0A0MRY4 1105 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 CA12O43570 354 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ITPKBP27987 946 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 UGT1A5P35504 534 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 SLC5A3P53794 718 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms