RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 KCNE2Q9Y6J6 123 aa11.06□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZNF99A8MXY4 864 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 IL23RQ5VWK5 629 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 C1QTNF1Q9BXJ1 281 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 PALLDQ8WX93 1383 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 F5H6K3 240 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 MAP2K4P45985 399 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 FNTBP49356 437 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 GSTM4Q03013 218 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 C4orf46Q504U0 113 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 RALGPS2Q86X27 583 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 COLGALT2Q8IYK4 626 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZNF317Q96PQ6 595 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 CDHR5Q9HBB8 845 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 KRBA1A5PL33 1030 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 EIF3FO00303 357 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 CYP3A4P08684 503 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 CTSEP14091 401 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZNF182P17025 639 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 SSX6Q7RTT6 188 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 UCK2Q9BZX2 261 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 BEX1Q9HBH7 125 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 HEMK1Q9Y5R4 338 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 RAD54BQ9Y620 910 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 G3V2T6 193 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 B3GAT3O94766 335 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 ABHD2P08910 425 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 HNRNPLP14866 589 aaKnown RBP eCLIP11.05□□□□□ -0.646e-7■■■■□ 24.4
CDC42BPA-205ENST00000366769 OR2L5Q8NG80 312 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 FADS2P1A8MWK0 482 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 MCIDASD6RGH6 385 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZNF81P51508 661 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 EPHB3P54753 998 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 GRAPQ13588 217 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 EMC2Q15006 297 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 STILQ15468 1287 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 GRAPLQ8TC17 118 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 IRGQQ8WZA9 623 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 SOHLH2Q9NX45 425 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 QPCTLQ9NXS2 382 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 U3KQV3 271 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 PGK1P00558 417 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 ACAD10Q6JQN1 1059 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 MFSD7Q6UXD7 560 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZNF677Q86XU0 584 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 EIF1ADQ8N9N8 165 aaKnown RBP11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 C1orf196B1AJZ1 125 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 TYMPP19971 482 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 MATN1P21941 496 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 POLD2P49005 469 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 PLD1Q13393 1074 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 FAM126BQ8IXS8 530 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 TMEM132CQ8N3T6 1108 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 PNPLA6Q8IY17 1366 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 IL7RP16871 459 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 POU6F1Q14863 301 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 GPR68Q15743 365 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 MPP5Q8N3R9 675 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 KIAA1257Q9ULG3 409 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 CNTNAP5Q8WYK1 1306 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 TRAV6A0A075B6T7 132 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 NTRK1P04629 796 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 NFIAQ12857 509 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 CCNG2Q16589 344 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 POM121L1PQ3SYA9 428 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 CLVS2Q5SYC1 327 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 ATL1Q8WXF7 558 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 NODALQ96S42 347 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 UBQLN2Q9UHD9 624 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 RPS6KA6Q9UK32 745 aa11.05□□□□□ -0.64
CDC42BPA-205ENST00000366769 A0A096LPK6 155 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 GLP2RO95838 553 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 SLC2A3P11169 496 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 BTN1A1Q13410 526 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZCCHC12Q6PEW1 402 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 LDHDQ86WU2 507 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 BIRC8Q96P09 236 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 HNRNPABQ99729 332 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 NDUFAF4Q9P032 175 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 PSME2Q9UL46 239 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 TMEM98Q9Y2Y6 226 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 GTPBP1O00178 669 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 CSF2P04141 144 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 ITGB3P05106 788 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 MGAT1P26572 445 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 PURAQ00577 322 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 REP15Q6BDI9 236 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 PDE10AQ9Y233 779 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 CDC42BPGQ6DT37 1551 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 GJA1P17302 382 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 IL6STP40189 918 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 PCDH1Q08174 1060 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZNF829Q3KNS6 432 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 FNDC3BQ53EP0 1204 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 RAP1GAP2Q684P5 730 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 OXR1Q8N573 874 aa11.04□□□□□ -0.64
CDC42BPA-205ENST00000366769 COLEC11Q9BWP8 271 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms