RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 TLR4O00206 839 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 KHNYNO15037 678 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 VILLO15195 856 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 STX7O15400 261 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 CRTAMO95727 393 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 SOD1P00441 154 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 LPOP22079 712 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 MGAT1P26572 445 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 DPP6P42658 865 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 C21orf59P57076 290 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 TEAD4Q15561 434 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 KIF19Q2TAC6 998 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 ESRP1Q6NXG1 681 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 LRRC8BQ6P9F7 803 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 SLC23A3Q6PIS1 610 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 KYAT3Q6YP21 454 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 NRSN1Q8IZ57 195 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 OR2I1PQ8NGU4 316 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 FUBP1Q96AE4 644 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 PWWP2AQ96N64 755 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 ERP44Q9BS26 406 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 LGR4Q9BXB1 951 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 SLC6A14Q9UN76 642 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 PKP3Q9Y446 797 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 SNX11Q9Y5W9 270 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 KNL1Q8NG31 2342 aa17.81■□□□□ 0.44
PDLIM7-202ENST00000355841 GPR39O43194 453 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 GFRA3O60609 400 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 SEC31AO94979 1220 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 ZNF806P0C7X5 589 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 TGM1P22735 817 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 GPR1P46091 355 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 ZNF140P52738 457 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 ITGA8P53708 1063 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 PFN3P60673 137 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 DPTQ07507 201 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 GRIK2Q13002 908 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 PDE1CQ14123 709 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 TRADDQ15628 312 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 HENMT1Q5T8I9 393 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 C8orf74Q6P047 294 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 FAM151BQ6UXP7 276 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 SPATS2Q86XZ4 545 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 MPP5Q8N3R9 675 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 SNF8Q96H20 258 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 DNAJC1Q96KC8 554 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 ZNF778Q96MU6 729 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 SERPINB12Q96P63 405 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 SPATA16Q9BXB7 569 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 IL26Q9NPH9 171 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 RXFP3Q9NSD7 469 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 SYBUQ9NX95 663 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 MYLKQ15746 1914 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 LNP1A1A4G5 178 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 FADS2P1A8MWK0 482 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 INPP4BO15327 924 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 TP73O15350 636 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 SARNPP82979 210 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 ZNF765Q7L2R6 523 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 RABEPKQ7Z6M1 372 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 TRIM74Q86UV6 250 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 HEATR4Q86WZ0 1026 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 CEP112Q8N8E3 955 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 MCUQ8NE86 351 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 APOOQ9BUR5 198 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 GTPBP2Q9BX10 602 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 NUSAP1Q9BXS6 441 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 CHRAC1Q9NRG0 131 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 SLC2A6Q9UGQ3 507 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 FKBPLQ9UIM3 349 aa17.8■□□□□ 0.44
PDLIM7-202ENST00000355841 PI4KAP42356 2102 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 RIF1Q5UIP0 2472 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 RGSL1A5PLK6 1076 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 MROH6A6NGR9 719 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 ENGP17813 658 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 RABIFP47224 123 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 NXPH1P58417 271 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 ZNF542PQ5EBM4 170 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 DUPD1Q68J44 220 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 HIBCHQ6NVY1 386 aaPredicted RBP17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 PCGF5Q86SE9 256 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 AGGF1Q8N302 714 aaeCLIP17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 MMGT1Q8N4V1 131 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 TRIM56Q9BRZ2 755 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 WDR26Q9H7D7 661 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 SUDS3Q9H7L9 328 aaPredicted RBP17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 KCTD5Q9NXV2 234 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 BFARQ9NZS9 450 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 ANAPC5Q9UJX4 755 aa17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 UTP11Q9Y3A2 253 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-202ENST00000355841 ESYT3A0FGR9 886 aa17.78■□□□□ 0.44
PDLIM7-202ENST00000355841 GAPDHSO14556 408 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-202ENST00000355841 ARHGAP33O14559 1287 aa17.78■□□□□ 0.44
PDLIM7-202ENST00000355841 BANF1O75531 89 aa17.78■□□□□ 0.44
PDLIM7-202ENST00000355841 TSHRP16473 764 aa17.78■□□□□ 0.44
PDLIM7-202ENST00000355841 ADRA1DP25100 572 aa17.78■□□□□ 0.44
PDLIM7-202ENST00000355841 CA5AP35218 305 aa17.78■□□□□ 0.44
PDLIM7-202ENST00000355841 TRIM23P36406 574 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms