RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CTC1Q2NKJ3 1217 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 LRRC73Q5JTD7 316 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 TSPAN33Q86UF1 283 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 CHST14Q8NCH0 376 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 PPM1EQ8WY54 764 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 ZFYVE19Q96K21 471 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 SAMD11Q96NU1 681 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 WWP1Q9H0M0 922 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 NKX2-4Q9H2Z4 354 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 IGFLR1Q9H665 355 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 GALPQ9UBC7 116 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 MED16Q9Y2X0 877 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 EPOPA6NHQ4 379 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 FCHO1O14526 889 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 ZBTB14O43829 449 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 SOCS5O75159 536 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 RHOBTB1O94844 696 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 KCNJ2P63252 427 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 FBXW10Q5XX13 1052 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 FAM151BQ6UXP7 276 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 POMKQ9H5K3 350 aa22.36■■□□□ 1.17
PDLIM2-203ENST00000339162 SOBPA7XYQ1 873 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 RFXAPO00287 272 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 MPSTP25325 297 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 PDAP1Q13442 181 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 DHCR24Q15392 516 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 ARL13AQ5H913 290 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 KLC3Q6P597 504 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 CELF5Q8N6W0 485 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 KLHL29Q96CT2 875 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 BIRC8Q96P09 236 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 CCDC68Q9H2F9 335 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 DUS2Q9NX74 493 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 MYO9BQ13459 2157 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 TMEM114B3SHH9 223 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 UGT2B4P06133 528 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 CA5AP35218 305 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 KPNA2P52292 529 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 ACAP2Q15057 778 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 DUSP6Q16828 381 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 SETMARQ53H47 684 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 CARD16Q5EG05 197 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 RPS27LQ71UM5 84 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 ISCA2Q86U28 154 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 GRIN3AQ8TCU5 1115 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 PTERQ96BW5 349 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 PHF21BQ96EK2 531 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 CCDC97Q96F63 343 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 ASIC4Q96FT7 647 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 DRC3Q9H069 523 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 MTG2Q9H4K7 406 aa22.35■■□□□ 1.17
PDLIM2-203ENST00000339162 NPIPB15A6NHN6 443 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 ZNF37AP17032 561 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 ALDH18A1P54886 795 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 EXT2Q93063 718 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 TCF12Q99081 682 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 SUV39H2Q9H5I1 410 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 ARL8BQ9NVJ2 186 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 CORO1CQ9ULV4 474 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 H7C0S8 307 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 ZNF195O14628 629 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 NIPSNAP2O75323 286 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 CYP17A1P05093 508 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 RPL26P61254 145 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 CDKN3Q16667 212 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 FAM78AQ5JUQ0 283 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 PPP2R2DQ66LE6 453 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 PAQR3Q6TCH7 311 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 C12orf40Q86WS4 652 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 ISG20Q96AZ6 181 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 GPR21Q99679 349 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 SLC30A3Q99726 388 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 CIPCQ9C0C6 399 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 RPL26L1Q9UNX3 145 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 SLC30A1Q9Y6M5 507 aa22.34■■□□□ 1.17
PDLIM2-203ENST00000339162 H3BMM5 538 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 H2AFYO75367 372 aaKnown RBP22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 CD1DP15813 335 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 POLR2EP19388 210 aaKnown RBP22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 ATP5F1P24539 256 aaPredicted RBP22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 TTPAP49638 278 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 PFKPQ01813 784 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 RCN2Q14257 317 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 RARS2Q5T160 578 aaKnown RBP22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 TRIM67Q6ZTA4 783 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 LSMEM2Q8N112 164 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 OTUB2Q96DC9 234 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 PPP1R36Q96LQ0 422 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 CDH19Q9H159 772 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 SLC40A1Q9NP59 571 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 TXLNGQ9NUQ3 528 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 ERVW-1Q9UQF0 538 aa22.33■■□□□ 1.17
PDLIM2-203ENST00000339162 CAPN8A6NHC0 703 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 A8MT66 165 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 IQCF5A8MTL0 148 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 TTC34A8MYJ7 566 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 PRAMEF1O95521 474 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 RBP1P09455 135 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 IDH3AP50213 366 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 SUOXP51687 545 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms