RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 HDXQ7Z353 690 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 PTAR1Q7Z6K3 402 aaPredicted RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 PNPLA1Q8N8W4 532 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 OR6P1Q8NGX9 317 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 CXorf40AQ8TE69 158 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 ZIM3Q96PE6 472 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 AGAP2Q99490 1192 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 PPANQ9NQ55 473 aaKnown RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 PKD2L2Q9NZM6 624 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 MARCH4Q9P2E8 410 aaPredicted RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 ZFR2Q9UPR6 939 aaKnown RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 TRPM6Q9BX84 2022 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 DOCK9Q9BZ29 2069 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 GPR39O43194 453 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A9O60656 530 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 PCDH8O95206 1070 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 GCAP28676 217 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 AVPR2P30518 371 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 MC4RP32245 332 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 FOXN2P32314 431 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 CA5AP35218 305 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 SPAM1P38567 509 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 SFSWAPQ12872 951 aaKnown RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 ACOX1Q15067 660 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 TEDDM1Q5T9Z0 273 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 ALS2CLQ60I27 953 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 FAM151BQ6UXP7 276 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 ZBTB9Q96C00 473 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 DTD2Q96FN9 168 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 CYTH2Q99418 400 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 TPSD1Q9BZJ3 242 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A7Q9HAW7 530 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A10Q9HAW8 530 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A8Q9HAW9 530 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 IARS2Q9NSE4 1012 aaKnown RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 NFKBIL1Q9UBC1 381 aaPredicted RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 WDFY4Q6ZS81 3184 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 IGLON5A6NGN9 336 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 MAP2K7O14733 419 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 RECQL5O94762 991 aaPredicted RBP21.43■■□□□ 1.02
TPM1-204ENST00000334895 CCR3P51677 355 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 SEMA3AQ14563 771 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 NEPROQ6NW34 567 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 AFTPHQ6ULP2 937 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 CNTN4Q8IWV2 1026 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 CAMKK1Q8N5S9 505 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 OR4L1Q8NH43 312 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 SCAMP4Q969E2 229 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 SGSM3Q96HU1 749 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 PLEKHG4BQ96PX9 1271 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 CYP8B1Q9UNU6 501 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 PSAT1Q9Y617 370 aa21.43■■□□□ 1.02
TPM1-204ENST00000334895 GLYATL1P3A0A0U1RQE8 302 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 RGSL1A5PLK6 1076 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 PRR23AA6NEV1 266 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 C10orf142B7Z368 130 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 WNT9AO14904 365 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 CDKN1CP49918 316 aaPredicted RBP21.42■■□□□ 1.02
TPM1-204ENST00000334895 DCDC1P59894 354 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 PPP2CBP62714 309 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 PPP2CAP67775 309 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 FGL2Q14314 439 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 STAT4Q14765 748 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 CHRNA6Q15825 494 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 TMEM259Q4ZIN3 620 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 CYP2U1Q7Z449 544 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 DENND6AQ8IWF6 608 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 RAVER1Q8IY67 606 aaKnown RBP21.42■■□□□ 1.02
TPM1-204ENST00000334895 FRMD1Q8N878 549 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 BTBD1Q9H0C5 482 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 ABCG8Q9H221 673 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 PREBQ9HCU5 417 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 VPS18Q9P253 973 aa21.42■■□□□ 1.02
TPM1-204ENST00000334895 EXOC1LA0A1B0GW35 172 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 A0A1W2PQU0 124 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 RNGTTO60942 597 aaKnown RBP21.41■■□□□ 1.02
TPM1-204ENST00000334895 SRP72O76094 671 aaKnown RBP21.41■■□□□ 1.02
TPM1-204ENST00000334895 PRAMEF1O95521 474 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 PTPN5P54829 565 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 ZNF844Q08AG5 666 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 THOC5Q13769 683 aaKnown RBP21.41■■□□□ 1.02
TPM1-204ENST00000334895 KLHL38Q2WGJ6 581 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 HENMT1Q5T8I9 393 aaKnown RBP21.41■■□□□ 1.02
TPM1-204ENST00000334895 ZNF470Q6ECI4 717 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 PSAPL1Q6NUJ1 521 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 MARK2Q7KZI7 788 aaKnown RBP21.41■■□□□ 1.02
TPM1-204ENST00000334895 LDB1Q86U70 411 aaPredicted RBP21.41■■□□□ 1.02
TPM1-204ENST00000334895 CTAGE3PQ8IX95 158 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 PIANPQ8IYJ0 282 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 PELI3Q8N2H9 469 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 PPM1NQ8N819 430 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 EPS8L3Q8TE67 593 aaKnown RBP21.41■■□□□ 1.02
TPM1-204ENST00000334895 RLN3Q8WXF3 142 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 DHRS4Q9BTZ2 278 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 FAM83DQ9H4H8 585 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 FAM96AQ9H5X1 160 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 SGK2Q9HBY8 427 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 SPATA6Q9NWH7 488 aaPredicted RBP21.41■■□□□ 1.02
TPM1-204ENST00000334895 ZFATQ9P243 1243 aa21.41■■□□□ 1.02
TPM1-204ENST00000334895 PLXNB3Q9ULL4 1909 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms