RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 FBXO44Q9H4M3 255 aa19.85■□□□□ 0.77
SOX2-201ENST00000325404 GID8Q9NWU2 228 aa19.85■□□□□ 0.77
SOX2-201ENST00000325404 MARCH4Q9P2E8 410 aaPredicted RBP19.85■□□□□ 0.77
SOX2-201ENST00000325404 MAP10Q9P2G4 905 aa19.85■□□□□ 0.77
SOX2-201ENST00000325404 PTBP2Q9UKA9 531 aaKnown RBP19.85■□□□□ 0.77
SOX2-201ENST00000325404 SLC8A2Q9UPR5 921 aa19.85■□□□□ 0.77
SOX2-201ENST00000325404 MIA3Q5JRA6 1907 aa19.85■□□□□ 0.77
SOX2-201ENST00000325404 CCDC160A6NGH7 325 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 AZIN1O14977 448 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 CSPG5O95196 566 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 GLP2RO95838 553 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 PBX3P40426 434 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 TBX4P57082 545 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 SH3BP2P78314 561 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 PRKCQQ04759 706 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 IHHQ14623 411 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 INPP5AQ14642 412 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 MS4A13Q5J8X5 152 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 LCN8Q6JVE9 175 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 RETREG3Q86VR2 466 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 OR9I1Q8NGQ6 314 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 TFAP2CQ92754 450 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 CCT7Q99832 543 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 NOL11Q9H8H0 719 aaKnown RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 PHF24Q9UPV7 400 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 TRIM64CA6NLI5 447 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 BMP10O95393 424 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 FGF1P05230 155 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 HAPLN1P10915 354 aaPredicted RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 ARSAP15289 507 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 PRMT2P55345 433 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 PAN2Q504Q3 1202 aaKnown RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 LRRC23Q53EV4 343 aaPredicted RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 CYP2R1Q6VVX0 501 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 ATP6V0D2Q8N8Y2 350 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 ZNF296Q8WUU4 475 aaPredicted RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 RMND5BQ96G75 393 aaPredicted RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 FUBP3Q96I24 572 aaKnown RBP eCLIP19.84■□□□□ 0.77
SOX2-201ENST00000325404 C8orf48Q96LL4 319 aa19.84■□□□□ 0.77
SOX2-201ENST00000325404 SDR39U1Q9NRG7 319 aaPredicted RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 DUS2Q9NX74 493 aaKnown RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 UXTQ9UBK9 157 aaPredicted RBP19.84■□□□□ 0.77
SOX2-201ENST00000325404 DRGXA6NNA5 263 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 TIAL1Q01085 375 aaKnown RBP eCLIP19.83■□□□□ 0.77
SOX2-201ENST00000325404 PARP15Q460N3 678 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 KCTD21Q4G0X4 260 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 KRT80Q6KB66 452 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 ZNF549Q6P9A3 640 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 CAMK1DQ8IU85 385 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 NUP93Q8N1F7 819 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 TRIML2Q8N7C3 387 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 PTGR2Q8N8N7 351 aaPredicted RBP19.83■□□□□ 0.77
SOX2-201ENST00000325404 DRAXINQ8NBI3 349 aaPredicted RBP19.83■□□□□ 0.77
SOX2-201ENST00000325404 SLC43A3Q8NBI5 491 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 EZH1Q92800 747 aaPredicted RBP19.83■□□□□ 0.77
SOX2-201ENST00000325404 CLK4Q9HAZ1 481 aaKnown RBP19.83■□□□□ 0.77
SOX2-201ENST00000325404 FBRSL1Q9HCM7 1045 aaKnown RBP19.83■□□□□ 0.77
SOX2-201ENST00000325404 ACTR3BQ9P1U1 418 aa19.83■□□□□ 0.77
SOX2-201ENST00000325404 CD3EAPO15446 510 aaKnown RBP19.83■□□□□ 0.76
SOX2-201ENST00000325404 CDK9P50750 372 aaKnown RBP19.83■□□□□ 0.76
SOX2-201ENST00000325404 MAXP61244 160 aa19.83■□□□□ 0.76
SOX2-201ENST00000325404 YWHAHQ04917 246 aaPredicted RBP19.83■□□□□ 0.76
SOX2-201ENST00000325404 TWIST2Q8WVJ9 160 aa19.83■□□□□ 0.76
SOX2-201ENST00000325404 CANT1Q8WVQ1 401 aa19.83■□□□□ 0.76
SOX2-201ENST00000325404 PABPC5Q96DU9 382 aaKnown RBP19.83■□□□□ 0.76
SOX2-201ENST00000325404 CIB1Q99828 191 aa19.83■□□□□ 0.76
SOX2-201ENST00000325404 RSL24D1Q9UHA3 163 aaKnown RBP19.83■□□□□ 0.76
SOX2-201ENST00000325404 TANC1Q9C0D5 1861 aa19.83■□□□□ 0.76
SOX2-201ENST00000325404 NME4O00746 187 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 TRMUO75648 421 aaKnown RBP19.82■□□□□ 0.76
SOX2-201ENST00000325404 RPP40O75818 363 aaKnown RBP19.82■□□□□ 0.76
SOX2-201ENST00000325404 ZNF37AP17032 561 aaPredicted RBP19.82■□□□□ 0.76
SOX2-201ENST00000325404 LBPP18428 481 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 ATP6V1B2P21281 511 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 SLC5A2P31639 672 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 YBEYP58557 167 aaPredicted RBP19.82■□□□□ 0.76
SOX2-201ENST00000325404 KIF19Q2TAC6 998 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 OGFOD2Q6N063 350 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 LAYNQ6UX15 382 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 ZNF598Q86UK7 904 aaKnown RBP19.82■□□□□ 0.76
SOX2-201ENST00000325404 ERI1Q8IV48 349 aaKnown RBP19.82■□□□□ 0.76
SOX2-201ENST00000325404 DCP1BQ8IZD4 617 aaKnown RBP19.82■□□□□ 0.76
SOX2-201ENST00000325404 PSMG2Q969U7 264 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 PPWD1Q96BP3 646 aaKnown RBP19.82■□□□□ 0.76
SOX2-201ENST00000325404 BTN2A3PQ96KV6 586 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 KLHL5Q96PQ7 755 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 ATOH8Q96SQ7 321 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 ZCWPW1Q9H0M4 648 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 TMEM45AQ9NWC5 275 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 ZNF839A8K0R7 811 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 ANGPT2O15123 496 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 MTHFD2P13995 350 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 IDO1P14902 403 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 IL10P22301 178 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 GRIA3P42263 894 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 TRAF7Q6Q0C0 670 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 PIM3Q86V86 326 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 SLC15A3Q8IY34 581 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 B4GALNT2Q8NHY0 566 aa19.82■□□□□ 0.76
SOX2-201ENST00000325404 BRSK1Q8TDC3 778 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms