RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 KYAT3Q6YP21 454 aaKnown RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 PTAR1Q7Z6K3 402 aaPredicted RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 ABI3BPQ7Z7G0 1075 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 IQCHQ86VS3 1027 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 NLRP8Q86W28 1048 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 PLA2G15Q8NCC3 412 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 GPR26Q8NDV2 337 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 PPHLN1Q8NEY8 458 aaKnown RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 KLHDC7BQ96G42 594 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 WHRNQ9P202 907 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 FNDC3AQ9Y2H6 1198 aaKnown RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 A0A1W2PR77 199 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 TSHRP16473 764 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 GPR1P46091 355 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 DCDC1P59894 354 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 OVGP1Q12889 678 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 PTPRCAPQ14761 206 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 GLE1Q53GS7 698 aaKnown RBP24.39■■□□□ 1.49
HOXC9-201ENST00000303450 TRIM61Q5EBN2 209 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 PCID2Q5JVF3 399 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 LAYNQ6UX15 382 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 PLEKHG4BQ96PX9 1271 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 RANBP9Q96S59 729 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 HINFPQ9BQA5 517 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 SPATA16Q9BXB7 569 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 SCN8AQ9UQD0 1980 aa24.39■■□□□ 1.49
HOXC9-201ENST00000303450 PATE3B3GLJ2 98 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 K7ESM1 405 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 VILLO15195 856 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 WNT1P04628 370 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 PYGLP06737 847 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 THEGLP0DJG4 465 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 SPAM1P38567 509 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 RABIFP47224 123 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 ZNF140P52738 457 aaPredicted RBP24.38■■□□□ 1.49
HOXC9-201ENST00000303450 C21orf59P57076 290 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 CRADDP78560 199 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 PLA2G2CQ5R387 149 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 HENMT1Q5T8I9 393 aaKnown RBP24.38■■□□□ 1.49
HOXC9-201ENST00000303450 SLC23A3Q6PIS1 610 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 KDM7AQ6ZMT4 941 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 Q6ZSR6 202 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 PELI3Q8N2H9 469 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 OR13H1Q8NG92 308 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 OR13C4Q8NGS5 318 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 RUBCNQ92622 972 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 FRMD8Q9BZ67 464 aaPredicted RBP24.38■■□□□ 1.49
HOXC9-201ENST00000303450 SMOC1Q9H4F8 434 aa24.38■■□□□ 1.49
HOXC9-201ENST00000303450 NFKBIL1Q9UBC1 381 aaPredicted RBP24.38■■□□□ 1.49
HOXC9-201ENST00000303450 CCDC78A2IDD5 438 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 MROH6A6NGR9 719 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 TOR1BO14657 336 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 KHNYNO15037 678 aaKnown RBP24.37■■□□□ 1.49
HOXC9-201ENST00000303450 MAGEC1O60732 1142 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 HADHAP40939 763 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 TMPRSS15P98073 1019 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 SKIDA1Q1XH10 827 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 NLRP9Q7RTR0 991 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 STYXQ8WUJ0 223 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 DNAJC1Q96KC8 554 aaKnown RBP24.37■■□□□ 1.49
HOXC9-201ENST00000303450 C19orf43Q9BQ61 176 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 IL26Q9NPH9 171 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 SYBUQ9NX95 663 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 SLC6A14Q9UN76 642 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 TCAF1Q9Y4C2 921 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 OR1A2Q9Y585 309 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 OTOGLQ3ZCN5 2332 aa24.37■■□□□ 1.49
HOXC9-201ENST00000303450 CACNA1EQ15878 2313 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 KNL1Q8NG31 2342 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 A0A1B0GVT2 93 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 SDR42E2A6NKP2 422 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 TLR4O00206 839 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 PFN3P60673 137 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 YPEL5P62699 121 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 GUCY2DQ02846 1103 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 SPEM2Q0P670 501 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 CASC4Q6P4E1 433 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 AGAP2Q99490 1192 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 ZSCAN5AQ9BUG6 496 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 APOOQ9BUR5 198 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 NUSAP1Q9BXS6 441 aaKnown RBP24.36■■□□□ 1.49
HOXC9-201ENST00000303450 WDR26Q9H7D7 661 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 CHRAC1Q9NRG0 131 aa24.36■■□□□ 1.49
HOXC9-201ENST00000303450 NLE1Q9NVX2 485 aaPredicted RBP24.36■■□□□ 1.49
HOXC9-201ENST00000303450 GLYATL1P3A0A0U1RQE8 302 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 TEAD1P28347 426 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 TRIM23P36406 574 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 MAGEA3P43357 314 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 THOP1P52888 689 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 DRG2P55039 364 aaKnown RBP24.35■■□□□ 1.49
HOXC9-201ENST00000303450 TSTD2Q5T7W7 516 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 FAM151BQ6UXP7 276 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 DCP2Q8IU60 420 aaKnown RBP24.35■■□□□ 1.49
HOXC9-201ENST00000303450 PDIK1LQ8N165 341 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 TRAM1L1Q8N609 369 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 PTCD2Q8WV60 388 aaKnown RBP24.35■■□□□ 1.49
HOXC9-201ENST00000303450 CAPN10Q9HC96 672 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 GRHL1Q9NZI5 618 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 SAMD15Q9P1V8 674 aa24.35■■□□□ 1.49
HOXC9-201ENST00000303450 FKBPLQ9UIM3 349 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms