RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 EGFRP00533 1210 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 HTR1BP28222 390 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ADRA1BP35368 520 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ACADSBP45954 432 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ADAM17P78536 824 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ADARB1P78563 741 aaKnown RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 DGCR6Q14129 220 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TIGD2Q4W5G0 525 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 PYCR3Q53H96 274 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 XAF1Q6GPH4 301 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 CATSPER4Q7RTX7 472 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ANKRD13BQ86YJ7 626 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 SPARTQ8N0X7 666 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ANKRD49Q8WVL7 239 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 WNT8BQ93098 351 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 BIRC7Q96CA5 298 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 GMLQ99445 158 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 IL12RB2Q99665 862 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 KIFC1Q9BW19 673 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 YTHDF1Q9BYJ9 559 aaKnown RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 GPN2Q9H9Y4 310 aaPredicted RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 DDIT4Q9NX09 232 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 SNTG2Q9NY99 539 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TRHDEQ9UKU6 1024 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 MGAMO43451 1857 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ZFC3H1O60293 1989 aaKnown RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TRIM64A6NGJ6 449 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TBC1D4O60343 1298 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 JRKO75564 520 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 RBP1P09455 135 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 HSD17B1P14061 328 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 PAMP19021 973 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 AGXTP21549 392 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 DIO3P55073 304 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ECT2LQ008S8 904 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TSPY1Q01534 308 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 IFITM3Q01628 133 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 SLC13A2Q13183 592 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 BCL2A1Q16548 175 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 LINC00523Q86TU6 105 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 CLIP4Q8N3C7 705 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TWIST2Q8WVJ9 160 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TMBIM1Q969X1 311 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TEKT5Q96M29 485 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 NSMCE2Q96MF7 247 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 DACH2Q96NX9 599 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 MCMBPQ9BTE3 642 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 GSTO2Q9H4Y5 243 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 EPS8L2Q9H6S3 715 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 HPS4Q9NQG7 708 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 SCHIP1Q9P0W5 487 aaPredicted RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 SHROOM3Q8TF72 1996 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 DLGAP3O95886 979 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ALOX5P09917 674 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TKTP29401 623 aaKnown RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 NR4A2P43354 598 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 SEPHS1P49903 392 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ARSFP54793 590 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 FOXA1P55317 472 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 POU4F1Q01851 419 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 C8orf82Q6P1X6 216 aaPredicted RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ARHGAP36Q6ZRI8 547 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 PIM3Q86V86 326 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 CLYBLQ8N0X4 340 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 PTGR2Q8N8N7 351 aaPredicted RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ZNF555Q8NEP9 628 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 SLC22A17Q8WUG5 538 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 TOR3AQ9H497 397 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ATP13A3Q9H7F0 1226 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 AS3MTQ9HBK9 375 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 PNMA8BQ9ULN7 279 aaPredicted RBP10.25□□□□□ -0.77
LMX1A-201ENST00000294816 ERVK-11Q9UQG0 969 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 PDE10AQ9Y233 779 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 CA8P35219 290 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 DAG1Q14118 895 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 SNX17Q15036 470 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 CYHR1Q6ZMK1 362 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 SLC22A9Q8IVM8 553 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 HS3ST5Q8IZT8 346 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 MINDY1Q8N5J2 469 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 AFG1LQ8WV93 481 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 EDEM1Q92611 657 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 NSUN5Q96P11 429 aaKnown RBP10.24□□□□□ -0.77
LMX1A-201ENST00000294816 GPR20Q99678 358 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 MIR1-1HGQ9H1L0 117 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 MYOZ2Q9NPC6 264 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 SLAMF8Q9P0V8 285 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 CRYL1Q9Y2S2 319 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 TIMM22Q9Y584 194 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 DNAJC15Q9Y5T4 150 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 FER1L6Q2WGJ9 1857 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 MTSS1O43312 755 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 PARNO95453 639 aaKnown RBP10.24□□□□□ -0.77
LMX1A-201ENST00000294816 PGK2P07205 417 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 LBPP18428 481 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 CRHBPP24387 322 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 KCNC1P48547 511 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 OAZ1P54368 228 aa10.24□□□□□ -0.77
LMX1A-201ENST00000294816 VBP1P61758 197 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms