RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KBTBD6Q86V97 674 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 CEP57Q86XR8 500 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 RFX6Q8HWS3 928 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ARL14Q8N4G2 192 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ZNF366Q8N895 744 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 NIPA2Q8N8Q9 360 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 FAM133AQ8N9E0 248 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 XXYLT1Q8NBI6 393 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 TNIP2Q8NFZ5 429 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 NEK11Q8NG66 645 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 PSMA8Q8TAA3 256 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ZNF480Q8WV37 535 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 SNX33Q8WV41 574 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 SAT2Q96F10 170 aaPredicted RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 NRBF2Q96F24 287 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 PGAM5Q96HS1 289 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 KAZALD1Q96I82 304 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ZNF512Q96ME7 567 aaPredicted RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 GPHA2Q96T91 129 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 MGME1Q9BQP7 344 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 CPPED1Q9BRF8 314 aaPredicted RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 CCDC106Q9BWC9 280 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ZNF341Q9BYN7 854 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 B3GNT4Q9C0J1 378 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 TINAGL1Q9GZM7 467 aaPredicted RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 TTYH1Q9H313 450 aaPredicted RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 BICC1Q9H694 974 aaKnown RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 WDR26Q9H7D7 661 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 PLEKHA2Q9HB19 425 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 GBA2Q9HCG7 927 aaPredicted RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 TMLHEQ9NVH6 421 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 PARPBPQ9NWS1 579 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 HCN3Q9P1Z3 774 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 LRIT1Q9P2V4 623 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 DKK4Q9UBT3 224 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 CDH7Q9ULB5 785 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 PADI1Q9ULC6 663 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 AGAP1Q9UPQ3 857 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 TNFSF13BQ9Y275 285 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ADAM18Q9Y3Q7 739 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 SNX14Q9Y5W7 946 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 CAPN7Q9Y6W3 813 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 TIAM2Q8IVF5 1701 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 DICER1Q9UPY3 1922 aaKnown RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 ANKRD36CQ5JPF3 1778 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 GOLGA6L10A0A0M3HER8 536 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 TCRBV21S2A2A0A5A6 115 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 EME2A4GXA9 379 aaPredicted RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 CDRT15L2A8MXV6 281 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 BTBD18B2RXH4 712 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 ADM5C9JUS6 153 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 SNAP23O00161 211 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 WNT10BO00744 389 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 TO15178 435 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 GRM6O15303 877 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 FOXN1O15353 648 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 DHHO43323 396 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 CYTIPO60759 359 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 LARGE1O95461 756 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 DIRAS3O95661 229 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 GNAI2P04899 355 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 CCDC172P0C7W6 258 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 UBTFL1P0CB47 393 aaPredicted RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 PRLRP16471 622 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 ZFXP17010 805 aaPredicted RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 AGAP20933 346 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 CDH3P22223 829 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 SFPQP23246 707 aaKnown RBP eCLIP4.64□□□□□ -1.67
CD44-202ENST00000278385 PRKCHP24723 683 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 PTPN7P35236 360 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 NF2P35240 595 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 SREBF1P36956 1147 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 USP8P40818 1118 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 CASRP41180 1078 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 POU6F2P78424 691 aaPredicted RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 ACY1Q03154 408 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 PTH1RQ03431 593 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 ZNF273Q14593 569 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 AAK1Q2M2I8 961 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 TEX35Q5T0J7 233 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 FCRL6Q6DN72 434 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 HMBOX1Q6NT76 420 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 RBM43Q6ZSC3 357 aaKnown RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 PARS2Q7L3T8 475 aaKnown RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 RHPN2Q8IUC4 686 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 APOBEC3FQ8IUX4 373 aaKnown RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 C1orf210Q8IVY1 113 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 FAM185AQ8N0U4 392 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 ZGPATQ8N5A5 531 aaKnown RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 TMEM116Q8NCL8 245 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 PIK3C3Q8NEB9 887 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 OR52M1Q8NGK5 317 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 HMGB4Q8WW32 186 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 ST8SIA2Q92186 375 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 RAPGEF5Q92565 580 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 ZKSCAN4Q969J2 545 aaPredicted RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 INTS12Q96CB8 462 aaKnown RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 EDC3Q96F86 508 aaKnown RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 FAM84BQ96KN1 310 aaPredicted RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 PPP1R10Q96QC0 940 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms