RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MX2P20592 715 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 C5AR1P21730 350 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
SGCA-201ENST00000262018 MAGEA4P43358 317 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 CCR10P46092 362 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 SGSHP51688 502 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 ARL4CP56559 192 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 BASP1P80723 227 aaKnown RBP13.37□□□□□ -0.27
SGCA-201ENST00000262018 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
SGCA-201ENST00000262018 GALNT2Q10471 571 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 TGIF1Q15583 401 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 TBR1Q16650 682 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 SKIDA1Q1XH10 827 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 MS4A13Q5J8X5 152 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 CEP85LQ5SZL2 805 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 UBAP2Q5T6F2 1119 aaKnown RBP13.37□□□□□ -0.27
SGCA-201ENST00000262018 PIK3R6Q5UE93 754 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 RBM44Q6ZP01 1051 aaKnown RBP13.37□□□□□ -0.27
SGCA-201ENST00000262018 CENPUQ71F23 418 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 CHSY1Q86X52 802 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 ZNF683Q8IZ20 524 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 FAM26EQ8N5C1 309 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 NPWQ8N729 165 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 OR2W6PQ8NHA6 318 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 CCDC110Q8TBZ0 833 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 ARL8AQ96BM9 186 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 HDAC11Q96DB2 347 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 SPATA13Q96N96 652 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 FAM129BQ96TA1 746 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 FERMT1Q9BQL6 677 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 EPN3Q9H201 632 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 TMBIM4Q9HC24 238 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 RAB6BQ9NRW1 208 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 NLGN3Q9NZ94 848 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 XPO7Q9UIA9 1087 aaKnown RBP13.37□□□□□ -0.27
SGCA-201ENST00000262018 DOCK4Q8N1I0 1966 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 GOLGA6L7A0A1B0GV03 622 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 TYW5A2RUC4 315 aaKnown RBP13.36□□□□□ -0.27
SGCA-201ENST00000262018 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 F5H5T6 163 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 PRAMEF26H0Y7S4 382 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 STK10O94804 968 aaKnown RBP13.36□□□□□ -0.27
SGCA-201ENST00000262018 ADH1BP00325 375 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 IL1BP01584 269 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 SHBGP04278 402 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 TACR2P21452 398 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 SLC6A4P31645 630 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 NUDT1P36639 197 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 FOXK1P85037 733 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 AP1B1Q10567 949 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 CDKN3Q16667 212 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 TTMPQ5BVD1 217 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 ANKRD20A2Q5SQ80 823 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 MPP7Q5T2T1 576 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 ANKRD20A1Q5TYW2 823 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 ANKRD20A3Q5VUR7 823 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 RAP1GAP2Q684P5 730 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 RWDD4Q6NW29 188 aaKnown RBP13.36□□□□□ -0.27
SGCA-201ENST00000262018 RFWD3Q6PCD5 774 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 CRTC1Q6UUV9 634 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 PPP1R21Q6ZMI0 780 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 C14orf80Q86SX3 495 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 TP53INP2Q8IXH6 220 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 LZTR1Q8N653 840 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 NETO2Q8NC67 525 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 HJURPQ8NCD3 748 aaPredicted RBP13.36□□□□□ -0.27
SGCA-201ENST00000262018 MRGPRX3Q96LB0 322 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 TTC25Q96NG3 672 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 PRMT1Q99873 361 aaKnown RBP13.36□□□□□ -0.27
SGCA-201ENST00000262018 MYOCQ99972 504 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 FRMD8Q9BZ67 464 aaPredicted RBP13.36□□□□□ -0.27
SGCA-201ENST00000262018 ETNK1Q9HBU6 452 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 SAYSD1Q9NPB0 183 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 PPARGC1AQ9UBK2 798 aaKnown RBP13.36□□□□□ -0.27
SGCA-201ENST00000262018 KIF26BQ2KJY2 2108 aa13.36□□□□□ -0.27
SGCA-201ENST00000262018 TDRD6O60522 2096 aaKnown RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 SPTBN1Q01082 2364 aaKnown RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 EDDM13A0A1B0GTR0 161 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 NEMP2A6NFY4 417 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 K7ESM1 405 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 RNF103O00237 685 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 MTSS1O43312 755 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 TBL1XO60907 577 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 ASLP04424 464 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 ITGA2BP08514 1039 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 ABHD2P08910 425 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 MYZAPP0CAP1 466 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 TPSB2P20231 275 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 FDFT1P37268 417 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 CSKP41240 450 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 GARSP41250 739 aaKnown RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 DMTNQ08495 405 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 IFFO1Q0D2I5 559 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 WASHC5Q12768 1159 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 SEMA5AQ13591 1074 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 TPSAB1Q15661 275 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 HIF1AQ16665 826 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 KYNUQ16719 465 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 RABGAP1LQ5R372 815 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms