RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 FAM172BPA6NC97 362 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 MSX2P35548 267 aaPredicted RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 ZNF143P52747 638 aaPredicted RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 ZNF155Q12901 538 aaPredicted RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 ACAP2Q15057 778 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 KCTD19Q17RG1 926 aaPredicted RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 CHSY3Q70JA7 882 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 MAP4K3Q8IVH8 894 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 CFAP52Q8N1V2 620 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 CCDC54Q8NEL0 328 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 OR8D1Q8WZ84 308 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 CEP295NLQ96MC4 621 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 MYPNQ86TC9 1320 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 SIN3BO75182 1162 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 CSH1P0DML2 217 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 CSH2P0DML3 217 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 PTPRAP18433 802 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 RPL22P35268 128 aaKnown RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 MAPK8P45983 427 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 ZNF132P52740 706 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 ZBTB6Q15916 424 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 TMEM119Q4V9L6 283 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 FAM129CQ86XR2 697 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 TMEM199Q8N511 208 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 SLC35C1Q96A29 364 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 C11orf24Q96F05 449 aaPredicted RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 GRIP1Q9Y3R0 1128 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 FAM86C2PA6NEL3 165 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 QSOX1O00391 747 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 CXCR3P49682 368 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 DEFB132Q7Z7B7 95 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 SLCO6A1Q86UG4 719 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 AP2M1Q96CW1 435 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 DHRS1Q96LJ7 313 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 TCF12Q99081 682 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 LGMNQ99538 433 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 LRMDAQ9H2I8 198 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 ENTPD5O75356 428 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 DLG1Q12959 904 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 FAM81AQ8TBF8 368 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 C18orf25Q96B23 403 aaPredicted RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 PWWP2AQ96N64 755 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 A0A1W2PQ72 361 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 NADKO95544 446 aaPredicted RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 ITGA2BP08514 1039 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 SMIM10L2AP0DMW4 78 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 SMIM10L2BP0DMW5 78 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 SHMT1P34896 483 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 MASP1P48740 699 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 DNASE1L1P49184 302 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 BST1Q10588 318 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 NOMO2Q5JPE7 1267 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 EARS2Q5JPH6 523 aaKnown RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 AKAP14Q86UN6 197 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 UBR7Q8N806 425 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 MAB21L3Q8N8X9 362 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 FEM1CQ96JP0 617 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 MARCH7Q9H992 704 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 RAP2CQ9Y3L5 183 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 PCDHB9Q9Y5E1 797 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 TRBC1P01850 177 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 FGBP02675 491 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 NT5EP21589 574 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 MRPS6P82932 125 aaKnown RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 PRKG2Q13237 762 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 FRRS1Q6ZNA5 592 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 GPR135Q8IZ08 494 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 FIBCD1Q8N539 461 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 C12orf50Q8NA57 414 aaPredicted RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 CITED4Q96RK1 184 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 ACE2Q9BYF1 805 aaPredicted RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 SNX15Q9NRS6 342 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 PNPLA3Q9NST1 481 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 CPSF4LA6NMK7 179 aaKnown RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 SLC22A3O75751 556 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 PCCBP05166 539 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 CASP5P51878 434 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 TGFB2P61812 414 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 DLG2Q15700 870 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 CPTPQ5TA50 214 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 EIF1ADQ8N9N8 165 aaKnown RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 ADAMTS15Q8TE58 950 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 TBC1D10AQ9BXI6 508 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 SEMA3GQ9NS98 782 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 EXD2Q9NVH0 621 aa14.26□□□□□ -0.13
CUX2-201ENST00000261726 ZNF490Q9ULM2 529 aaPredicted RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 MRPS33Q9Y291 106 aaKnown RBP14.26□□□□□ -0.13
CUX2-201ENST00000261726 CCNDBP1O95273 360 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 IDO1P14902 403 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 SEC23AQ15436 765 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 PGM2Q96G03 612 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 MCCC1Q96RQ3 725 aaPredicted RBP14.25□□□□□ -0.13
CUX2-201ENST00000261726 PFDN2Q9UHV9 154 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 VEGFAP15692 232 aaPredicted RBP14.25□□□□□ -0.13
CUX2-201ENST00000261726 GNALP38405 381 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 TNFSF9P41273 254 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 PDX1P52945 283 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 NR1H2P55055 460 aa14.25□□□□□ -0.13
CUX2-201ENST00000261726 CDH13P55290 713 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms