RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NUDT18Q6ZVK8 323 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 CACUL1Q86Y37 369 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 CEP97Q8IW35 865 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 LMNTD2Q8IXW0 634 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 SRPK1Q96SB4 655 aaKnown RBP18.54■□□□□ 0.56
SNX17-201ENST00000233575 IL26Q9NPH9 171 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 TRPV5Q9NQA5 729 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 NKIRAS1Q9NYS0 192 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 SHOX2O60902 331 aaPredicted RBP18.54■□□□□ 0.56
SNX17-201ENST00000233575 IL9P15248 144 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 OGNP20774 298 aaKnown RBP18.54■□□□□ 0.56
SNX17-201ENST00000233575 TNFRSF4P43489 277 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 IRF9Q00978 393 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 USP10Q14694 798 aaKnown RBP18.54■□□□□ 0.56
SNX17-201ENST00000233575 GPR26Q8NDV2 337 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 TMIEQ8NEW7 156 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 PBXIP1Q96AQ6 731 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 ELMO2Q96JJ3 720 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 OMDQ99983 421 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 PAIP2Q9BPZ3 127 aaKnown RBP18.54■□□□□ 0.56
SNX17-201ENST00000233575 VPS11Q9H270 941 aa18.54■□□□□ 0.56
SNX17-201ENST00000233575 MTF2Q9Y483 593 aaPredicted RBP18.54■□□□□ 0.56
SNX17-201ENST00000233575 SPINT1O43278 529 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 PRAMEF1O95521 474 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 CSRP3P50461 194 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 SLC18A1P54219 525 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 TAS2R39P59534 338 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 RALGDSQ12967 914 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 LEXMQ3ZCV2 418 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 ZNF549Q6P9A3 640 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 GALNT7Q86SF2 657 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 RALGPS2Q86X27 583 aaPredicted RBP18.53■□□□□ 0.56
SNX17-201ENST00000233575 CCDC97Q96F63 343 aaPredicted RBP18.53■□□□□ 0.56
SNX17-201ENST00000233575 OLFM1Q99784 485 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 ZNF358Q9NW07 568 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 CKAP5Q14008 2032 aa18.53■□□□□ 0.56
SNX17-201ENST00000233575 A0A096LPK6 155 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 SHISA7A6NL88 538 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 SRP72O76094 671 aaKnown RBP18.52■□□□□ 0.56
SNX17-201ENST00000233575 ASMTLO95671 621 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 C2P06681 752 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 PMLP29590 882 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 LSP1P33241 339 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 PSMD8P48556 350 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 TMEM196Q5HYL7 178 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 LVRNQ6Q4G3 990 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 HSD11B1LQ7Z5J1 315 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 PLD6Q8N2A8 252 aaKnown RBP18.52■□□□□ 0.56
SNX17-201ENST00000233575 GABPB2Q8TAK5 448 aaPredicted RBP18.52■□□□□ 0.56
SNX17-201ENST00000233575 SGSM3Q96HU1 749 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 FAM111AQ96PZ2 611 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 PRDM6Q9NQX0 595 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 SUN2Q9UH99 717 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 CD84Q9UIB8 345 aa18.52■□□□□ 0.56
SNX17-201ENST00000233575 OR1I1O60431 355 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 DNAJC6O75061 913 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 XPAP23025 273 aaPredicted RBP18.52■□□□□ 0.55
SNX17-201ENST00000233575 ITGB7P26010 798 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 VIPR1P32241 457 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 SDCCAG8Q86SQ7 713 aaPredicted RBP18.52■□□□□ 0.55
SNX17-201ENST00000233575 TAX1BP1Q86VP1 789 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 SUGP1Q8IWZ8 645 aaKnown RBP18.52■□□□□ 0.55
SNX17-201ENST00000233575 ACMSDQ8TDX5 336 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 NAT14Q8WUY8 206 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 DNASE1L2Q92874 299 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 RABEP2Q9H5N1 569 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 MKS1Q9NXB0 559 aa18.52■□□□□ 0.55
SNX17-201ENST00000233575 GLYATL1P3A0A0U1RQE8 302 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 ZWINTO95229 277 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 SLC35E2BP0CK96 405 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 UGT1A6P19224 532 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 CD72P21854 359 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 UGT1A1P22309 533 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 UGT1A4P22310 534 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 UGT1A3P35503 534 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 UGT1A5P35504 534 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 SPAM1P38567 509 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 MMP12P39900 470 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 ETV4P43268 484 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 CLCN5P51795 746 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 ARHGEF7Q14155 803 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 TERF2Q15554 542 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 CHRNA6Q15825 494 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 HECTD2Q5U5R9 776 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 KIAA1211LQ6NV74 962 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 C16orf46Q6P387 395 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 TAS2R42Q7RTR8 314 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 HCAR2Q8TDS4 363 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 LPGAT1Q92604 370 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 CENPTQ96BT3 561 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 PLLPQ9Y342 182 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 SLC30A1Q9Y6M5 507 aa18.51■□□□□ 0.55
SNX17-201ENST00000233575 UBA6A0AVT1 1052 aaPredicted RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 CYP2A6P11509 494 aaPredicted RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 CRHR1P34998 444 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 SPINT3P49223 89 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 SEC24CP53992 1094 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 CDKN2DP55273 166 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 CACNG1Q06432 222 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 NFATC2Q13469 925 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms