RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 CCDC85BQ15834 202 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-213ENST00000620219 LRRC8EQ6NSJ5 796 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 DOK6Q6PKX4 331 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 CELF5Q8N6W0 485 aaKnown RBP15.71■□□□□ 0.11
CPSF1-213ENST00000620219 PHOSPHO2Q8TCD6 241 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 RAB3IPQ96QF0 476 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-213ENST00000620219 DHRS4Q9BTZ2 278 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 IL37Q9NZH6 218 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 IQCF5A8MTL0 148 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 WASH4PA8MWX3 477 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 GPR39O43194 453 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 CCDC22O60826 627 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 MTX2O75431 263 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 SEC13P55735 322 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 FAM45BPQ6NSW5 357 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 ERAP2Q6P179 960 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 FAM43BQ6ZT52 329 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-213ENST00000620219 LONP2Q86WA8 852 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 DCBLD1Q8N8Z6 715 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 FAM45AQ8TCE6 357 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 ZNF398Q8TD17 642 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 KCNV2Q8TDN2 545 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 HEXDCQ8WVB3 486 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 EML4Q9HC35 981 aaKnown RBP15.71■□□□□ 0.11
CPSF1-213ENST00000620219 SPO11Q9Y5K1 396 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 HIST1H2AGP0C0S8 130 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-213ENST00000620219 HIST1H2ADP20671 130 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 SERPINB5P36952 375 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 ARF5P84085 180 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 NRG1Q02297 640 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-213ENST00000620219 KDELC1Q6UW63 502 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 ARHGAP24Q8N264 748 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 ARRDC2Q8TBH0 407 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 HIST1H2AHQ96KK5 128 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 CEP295NLQ96MC4 621 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 HIST1H2AJQ99878 128 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 H2AFJQ9BTM1 129 aa15.71■□□□□ 0.11
CPSF1-213ENST00000620219 KATNA1O75449 491 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 POP4O95707 220 aaKnown RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 ABCE1P61221 599 aaKnown RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 SULT2A1Q06520 285 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 TNK2Q07912 1038 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 THEMIS2Q5TEJ8 643 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 SDE2Q6IQ49 451 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 TTC30BQ8N4P2 665 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 PTGR2Q8N8N7 351 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 PIWIL2Q8TC59 973 aaKnown RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 ZNF419Q96HQ0 510 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 KXD1Q9BQD3 176 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 TRIM54Q9BYV2 358 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 SUV39H2Q9H5I1 410 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 IL21Q9HBE4 155 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 PFDN4Q9NQP4 134 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 ZNF711Q9Y462 761 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 B2RBV5 119 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 CLASP2O75122 1294 aaKnown RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 NIPSNAP2O75323 286 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 RB1P06400 928 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 TPBGLP0DKB5 382 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 GDI1P31150 447 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 HOXC13P31276 330 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 CCR10P46092 362 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 IL2P60568 153 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 GRAMD4Q6IC98 578 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 MYO1HQ8N1T3 1032 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 FBXO39Q8N4B4 442 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 CSGALNACT1Q8TDX6 532 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 EBF4Q9BQW3 602 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 SEMA4BQ9NPR2 832 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 WWOXQ9NZC7 414 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 ANKRD6Q9Y2G4 727 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 GLYATL1P3A0A0U1RQE8 302 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 HMX2A2RU54 273 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 MAGEA3P43357 314 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 CUL3Q13618 768 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 SEL1L3Q68CR1 1132 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 MARK4Q96L34 752 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 NMUR2Q9GZQ4 415 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 A8MUI8 341 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 BAG2O95816 211 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 NCALDP61601 193 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 ART3Q13508 389 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 TAF1AQ15573 450 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 SLC5A9Q2M3M2 681 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 C2orf27AQ580R0 203 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 UGT3A1Q6NUS8 523 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 C22orf39Q6P5X5 142 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 RPS27LQ71UM5 84 aaKnown RBP15.7■□□□□ 0.1
CPSF1-213ENST00000620219 BNIPLQ7Z465 357 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 PARP9Q8IXQ6 854 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 CIDEBQ9UHD4 219 aa15.7■□□□□ 0.1
CPSF1-213ENST00000620219 ATP6AP2A0A1C7CYW4 349 aa15.69■□□□□ 0.1
CPSF1-213ENST00000620219 MEI4A8MW99 385 aa15.69■□□□□ 0.1
CPSF1-213ENST00000620219 ATP6AP2O75787 350 aa15.69■□□□□ 0.1
CPSF1-213ENST00000620219 DNAJB1P25685 340 aa15.69■□□□□ 0.1
CPSF1-213ENST00000620219 KRT33BQ14525 404 aa15.69■□□□□ 0.1
CPSF1-213ENST00000620219 CARD16Q5EG05 197 aa15.69■□□□□ 0.1
CPSF1-213ENST00000620219 KCTD11Q693B1 232 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms