RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 APPL1Q9UKG1 709 aa16.79■□□□□ 0.28
TRAPPC3-210ENST00000617904 SLC30A1Q9Y6M5 507 aa16.79■□□□□ 0.28
TRAPPC3-210ENST00000617904 WASH3PC4AMC7 463 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 CD3EAPO15446 510 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 FZD6O60353 706 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 UGT1A9O60656 530 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 RFPL1O75677 317 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 STMN1P16949 149 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 CD72P21854 359 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 RPA3P35244 121 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 ABL2P42684 1182 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 ID4P47928 161 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 TTPAP49638 278 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 CCNHP51946 323 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 ITPRIPL2Q3MIP1 535 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 CCDC153Q494R4 210 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 DGKKQ5KSL6 1271 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 LYPLAL1Q5VWZ2 237 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 FSTL4Q6MZW2 842 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 LVRNQ6Q4G3 990 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 GDPD4Q6W3E5 623 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 PTAR1Q7Z6K3 402 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 CAMK1DQ8IU85 385 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 DCLK2Q8N568 766 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 TTC8Q8TAM2 541 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 TCP10LQ8TDR4 215 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 CSGALNACT1Q8TDX6 532 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 CKAP2Q8WWK9 683 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 GRAMD1AQ96CP6 724 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 CDKN2AIPNLQ96HQ2 116 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 SERAC1Q96JX3 654 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 AGAP2Q99490 1192 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 GPR22Q99680 433 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 SLC13A1Q9BZW2 595 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 VPS11Q9H270 941 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 UGT1A7Q9HAW7 530 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 UGT1A10Q9HAW8 530 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 UGT1A8Q9HAW9 530 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 ZFYVE1Q9HBF4 777 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 LTB4R2Q9NPC1 389 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 SNX15Q9NRS6 342 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 SLC2A6Q9UGQ3 507 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 ZNF711Q9Y462 761 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 ARL5AQ9Y689 179 aa16.78■□□□□ 0.28
TRAPPC3-210ENST00000617904 A0A087X1B8 175 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 CAPN8A6NHC0 703 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 SHISA7A6NL88 538 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 FAM170BA6NMN3 283 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 TPP1O14773 563 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 NPC1O15118 1278 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 NDUFS3O75489 264 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 PRNPP04156 253 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 APODP05090 189 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 CISD3P0C7P0 127 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 ARSAP15289 507 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 FCARP24071 287 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 HMGCLP35914 325 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 SLC1A2P43004 574 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 CTSOP43234 321 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 LEPRP48357 1165 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 STK19P49842 368 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 ZNF140P52738 457 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 MSLNQ13421 630 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 UBXN2BQ14CS0 331 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 TSNAXIP1Q2TAA8 658 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 FNDC3BQ53EP0 1204 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 TRIM68Q6AZZ1 485 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 FAM45BPQ6NSW5 357 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 ZC3H14Q6PJT7 736 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 VITQ6UXI7 678 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 MICALCLQ6ZW33 695 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 ZC3HC1Q86WB0 502 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 STK40Q8N2I9 435 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 OR13J1Q8NGT2 312 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 GDAP1Q8TB36 358 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 FAM45AQ8TCE6 357 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 ISL2Q96A47 359 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 DNAJC1Q96KC8 554 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 TBATAQ96M53 351 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 KLF6Q99612 283 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 SUN2Q9UH99 717 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 SLC39A10Q9ULF5 831 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 PSAT1Q9Y617 370 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 COMMD10Q9Y6G5 202 aa16.77■□□□□ 0.28
TRAPPC3-210ENST00000617904 EP300Q09472 2414 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC3-210ENST00000617904 A0A0J9YYE9 177 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 EDDM13A0A1B0GTR0 161 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 FAM95CA0A1B0GW59 222 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 TBC1D3BA6NDS4 549 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 F8W8V4 182 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 GJB3O75712 270 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 FAM107AO95990 144 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 GOT2P00505 430 aaKnown RBP16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 PRLP01236 227 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 TRBC1P01850 177 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 PDHA1P08559 390 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 TMPRSS15P98073 1019 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 ASPHQ12797 758 aa16.76■□□□□ 0.27
TRAPPC3-210ENST00000617904 CTBP1Q13363 440 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms