RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 HNRNPA1L2Q32P51 320 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 ZNF789Q5FWF6 425 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 PPM1JQ5JR12 505 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 KYAT3Q6YP21 454 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 LDB1Q86U70 411 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 ELMO2Q96JJ3 720 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 ZNF317Q96PQ6 595 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 C12orf65Q9H3J6 166 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 CAB39LQ9H9S4 337 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 DKK3Q9UBP4 350 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 TLK1Q9UKI8 766 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 ANKRD6Q9Y2G4 727 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 PRRC2BQ5JSZ5 2229 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 TSPAN11A1L157 253 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 PFDN6O15212 129 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 CLDN7O95471 211 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 APODP05090 189 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 C2P06681 752 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 NFKBIAP25963 317 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 MC4RP32245 332 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 FOXN2P32314 431 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 PTPN5P54829 565 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 ZNF234Q14588 700 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 CRTC1Q6UUV9 634 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 RAPH1Q70E73 1250 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 PACS2Q86VP3 889 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 SLC41A1Q8IVJ1 513 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 CBARPQ8N350 705 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 GPATCH11Q8N954 259 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 MTG2Q9H4K7 406 aa17.63■□□□□ 0.41
SHKBP1-224ENST00000600718 A0A0U1RQS6 177 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 NPIPB15A6NHN6 443 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 BMP1P13497 986 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 STMN1P16949 149 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 SAT1P21673 171 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 STC1P52823 247 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 SLC12A2P55011 1212 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 RAB10P61026 200 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 XIAPP98170 497 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 PEX6Q13608 980 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 SEMA3AQ14563 771 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 PDK4Q16654 411 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 ZNF805Q5CZA5 627 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 NAIF1Q69YI7 327 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 LCA5Q86VQ0 697 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 PLCD3Q8N3E9 789 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 BCAS4Q8TDM0 211 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 CSGALNACT1Q8TDX6 532 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 CHFRQ96EP1 664 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 TSPAN17Q96FV3 270 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 CCT8L2Q96SF2 557 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 OMDQ99983 421 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 TMEM245Q9H330 911 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 THAP10Q9P2Z0 257 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 VPS9D1Q9Y2B5 631 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 LAMA3Q16787 3333 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 PRNPP04156 253 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 CTSLP07711 333 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 COL6A2P12110 1019 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 E2F5Q15329 346 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 ZKSCAN8Q15776 578 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 TAF1BQ53T94 588 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 ZRANB3Q5FWF4 1079 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 AARS2Q5JTZ9 985 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 RGS9BPQ6ZS82 235 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 ZNF366Q8N895 744 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 SUN2Q9UH99 717 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 APPL1Q9UKG1 709 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 VWA7Q9Y334 891 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 SLC30A1Q9Y6M5 507 aa17.62■□□□□ 0.41
SHKBP1-224ENST00000600718 GRXCR2A6NFK2 248 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 TCP11X1B4DZS4 312 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 H3BQ06 376 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 NDUFS3O75489 264 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 FAM107AO95990 144 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 VIMP08670 466 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 CYP2A6P11509 494 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 TTPAP49638 278 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 TAS2R39P59534 338 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 CACNG1Q06432 222 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 C9orf64Q5T6V5 341 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 RNF187Q5TA31 235 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 SERPINA13PQ6UXR4 307 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 CLEC14AQ86T13 490 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 TSPAN33Q86UF1 283 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 SFTPA1Q8IWL2 248 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 SUGP1Q8IWZ8 645 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 TMIEQ8NEW7 156 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 OR8D1Q8WZ84 308 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 ACOT9Q9Y305 439 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 KIAA1549LQ6ZVL6 1849 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 COL4A3Q01955 1670 aa17.61■□□□□ 0.41
SHKBP1-224ENST00000600718 TIMP2P16035 220 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 TAC1P20366 129 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 SERPINB4P48594 390 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 GTF2A1P52655 376 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 RBM20Q5T481 1227 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 N4BP2L1Q5TBK1 243 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 HECTD2Q5U5R9 776 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 FAM45BPQ6NSW5 357 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms