RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 RBM15Q96T37 977 aaKnown RBP eCLIP22.58■■□□□ 1.21
CCDC9-204ENST00000599398 CCDC86Q9H6F5 360 aaKnown RBP22.58■■□□□ 1.21
CCDC9-204ENST00000599398 FGF22Q9HCT0 170 aa22.58■■□□□ 1.21
CCDC9-204ENST00000599398 MRPL40Q9NQ50 206 aaKnown RBP22.58■■□□□ 1.21
CCDC9-204ENST00000599398 DNPEPQ9ULA0 475 aa22.58■■□□□ 1.21
CCDC9-204ENST00000599398 RPL26L1Q9UNX3 145 aaKnown RBP22.58■■□□□ 1.21
CCDC9-204ENST00000599398 hCG_1818297A0A087WSY0 165 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 TRABD2BA6NFA1 517 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 MYCLP1P12525 358 aaPredicted RBP22.57■■□□□ 1.2
CCDC9-204ENST00000599398 ZNF30P17039 623 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 CDC25BP30305 580 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 RPIAP49247 311 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 VAV2P52735 878 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 TARDBPQ13148 414 aaKnown RBP eCLIP22.57■■□□□ 1.2
CCDC9-204ENST00000599398 TECPR1Q7Z6L1 1165 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 NT5DC3Q86UY8 548 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 GKN2Q86XP6 184 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 PDCD7Q8N8D1 485 aaKnown RBP22.57■■□□□ 1.2
CCDC9-204ENST00000599398 EXD1Q8NHP7 514 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 MDM1Q8TC05 714 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 TFB1MQ8WVM0 346 aaKnown RBP22.57■■□□□ 1.2
CCDC9-204ENST00000599398 BOCQ9BWV1 1114 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 LACRTQ9GZZ8 138 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 ABCG4Q9H172 646 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 CYP4F12Q9HCS2 524 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 IMPACTQ9P2X3 320 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 DGKBQ9Y6T7 804 aa22.57■■□□□ 1.2
CCDC9-204ENST00000599398 RP1P56715 2156 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 ACACAQ13085 2346 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 GP1BAP07359 652 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 GPR1P46091 355 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 PTSQ03393 145 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 ADCY2Q08462 1091 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 CAMK2BQ13554 666 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 GUSBP11Q6P575 273 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 RFLNAQ6ZTI6 216 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 EFL1Q7Z2Z2 1120 aaKnown RBP22.56■■□□□ 1.2
CCDC9-204ENST00000599398 KDELC2Q7Z4H8 507 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 ZC3H18Q86VM9 953 aaKnown RBP22.56■■□□□ 1.2
CCDC9-204ENST00000599398 SLC35F3Q8IY50 421 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 AP2M1Q96CW1 435 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 HEMGNQ9BXL5 484 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 ADGRE3Q9BY15 652 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 SUDS3Q9H7L9 328 aaPredicted RBP22.56■■□□□ 1.2
CCDC9-204ENST00000599398 SIRPGQ9P1W8 387 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 GULP1Q9UBP9 304 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 CLCA2Q9UQC9 943 aa22.56■■□□□ 1.2
CCDC9-204ENST00000599398 DMXL2Q8TDJ6 3036 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 C1orf232A0A0U1RR37 186 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 BTNL10A8MVZ5 291 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 GOLGA6L6A8MZA4 724 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 TNFRSF10CO14798 259 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 OPA1O60313 960 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 CLDN7O95471 211 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 CTNNA1P35221 906 aaKnown RBP22.55■■□□□ 1.2
CCDC9-204ENST00000599398 CDK3Q00526 305 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 GALNT3Q14435 633 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 PRKD1Q15139 912 aaPredicted RBP22.55■■□□□ 1.2
CCDC9-204ENST00000599398 PCSK7Q16549 785 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 QPCTQ16769 361 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 TEX44Q53QW1 395 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 CCDC181Q5TID7 509 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 SDR16C5Q8N3Y7 309 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 KIAA1524Q8TCG1 905 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 MAPK15Q8TD08 544 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 IMP4Q96G21 291 aaKnown RBP22.55■■□□□ 1.2
CCDC9-204ENST00000599398 MLPHQ9BV36 600 aaPredicted RBP22.55■■□□□ 1.2
CCDC9-204ENST00000599398 TEX101Q9BY14 249 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 SLC25A51Q9H1U9 297 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 ABCG8Q9H221 673 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 GPR34Q9UPC5 381 aa22.55■■□□□ 1.2
CCDC9-204ENST00000599398 PRSS38A1L453 326 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 ANKRD66B4E2M5 251 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 MT-CO3P00414 261 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 PTPN3P26045 913 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 STC1P52823 247 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 DPTQ07507 201 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 PPP2R5EQ16537 467 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 LVRNQ6Q4G3 990 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 TAF8Q7Z7C8 310 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 TMEM139Q8IV31 216 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 SCAMP4Q969E2 229 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 CARS2Q9HA77 564 aaKnown RBP22.54■■□□□ 1.2
CCDC9-204ENST00000599398 GLOD4Q9HC38 313 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 PCDHA3Q9Y5H8 950 aa22.54■■□□□ 1.2
CCDC9-204ENST00000599398 APC2O95996 2303 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 EME2A4GXA9 379 aaPredicted RBP22.53■■□□□ 1.2
CCDC9-204ENST00000599398 PJA2O43164 708 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 KRT37O76014 449 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 CYP4F3Q08477 520 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 DOK6Q6PKX4 331 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 ARL10Q8N8L6 244 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 SPATA22Q8NHS9 363 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 CCHCR1Q8TD31 782 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 NAT6Q93015 286 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 LYSMD1Q96S90 227 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 DESI2Q9BSY9 194 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 TMEM168Q9H0V1 697 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 PADI4Q9UM07 663 aa22.53■■□□□ 1.2
CCDC9-204ENST00000599398 ANKRD11Q6UB99 2663 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms