RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 NTN3O00634 580 aaPredicted RBP13.03□□□□□ -0.32
LIG1-212ENST00000596549 TNFRSF10CO14798 259 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 CEACAM5P06731 702 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 MX2P20592 715 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 KELP23276 732 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 ITPKBP27987 946 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 RPIAP49247 311 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 IFI35P80217 286 aaPredicted RBP13.03□□□□□ -0.32
LIG1-212ENST00000596549 SKOR1P84550 965 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 ARHGEF7Q14155 803 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 TSR1Q2NL82 804 aaKnown RBP13.03□□□□□ -0.32
LIG1-212ENST00000596549 RAET1GQ6H3X3 334 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 PDZD3Q86UT5 571 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 SDR16C5Q8N3Y7 309 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 LPCAT1Q8NF37 534 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 TPCN2Q8NHX9 752 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 GLMNQ92990 594 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 ATXN7L3BQ96GX2 97 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 AGAP2Q99490 1192 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 ABCG4Q9H172 646 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 ASCL3Q9NQ33 180 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 GULP1Q9UBP9 304 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 INTUQ9ULD6 942 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 HEY1Q9Y5J3 304 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 ST14Q9Y5Y6 855 aa13.03□□□□□ -0.32
LIG1-212ENST00000596549 A0A1W2PQM1 296 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 GOLGA6CA6NDK9 693 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 GOLGA6BA6NDN3 693 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 B4DGG1 531 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 APOL1O14791 398 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 TCEA3O75764 348 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 DXOO77932 396 aaKnown RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 LCA5LO95447 670 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 GOLGA6DP0CG33 693 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 ZNF30P17039 623 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 COMTP21964 271 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 TEAD1P28347 426 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 CD86P42081 329 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 ABCG1P45844 678 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 MARCKSL1P49006 195 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 STC1P52823 247 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 HADHBP55084 474 aaKnown RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 PTSQ03393 145 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 DPTQ07507 201 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 C3orf38Q5JPI3 329 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 MFSD7Q6UXD7 560 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 RBM44Q6ZP01 1051 aaKnown RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 B3GNT8Q7Z7M8 397 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 TRIM74Q86UV6 250 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 CCNYQ8ND76 341 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 SCAMP4Q969E2 229 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 RNF25Q96BH1 459 aaPredicted RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 PRR11Q96HE9 360 aaPredicted RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 WDR24Q96S15 920 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 LYSMD1Q96S90 227 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 BRD8Q9H0E9 1235 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 ABCG8Q9H221 673 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 SUDS3Q9H7L9 328 aaPredicted RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 SYNDIG1Q9H7V2 258 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 CARS2Q9HA77 564 aaKnown RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 PCDH9Q9HC56 1237 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 PHPT1Q9NRX4 125 aaPredicted RBP13.02□□□□□ -0.33
LIG1-212ENST00000596549 GOLGA6AQ9NYA3 693 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 MOSPD1Q9UJG1 213 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 SUFUQ9UMX1 484 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 SATB2Q9UPW6 733 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 ZFYVE26Q68DK2 2539 aa13.02□□□□□ -0.33
LIG1-212ENST00000596549 KNTC1P50748 2209 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 D6RAR5 112 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 JCHAINP01591 159 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 TNNT1P13805 278 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 PECAM1P16284 738 aaPredicted RBP13.01□□□□□ -0.33
LIG1-212ENST00000596549 NFKBIAP25963 317 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 AK4P27144 223 aaPredicted RBP13.01□□□□□ -0.33
LIG1-212ENST00000596549 POLD2P49005 469 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 EPHB1P54762 984 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 DYNLT1P63172 113 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 GALNT3Q14435 633 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 HLTFQ14527 1009 aaKnown RBP eCLIP13.01□□□□□ -0.33
LIG1-212ENST00000596549 TAZQ16635 292 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 QPCTQ16769 361 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 CERCAMQ5T4B2 595 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 OGFOD3Q6PK18 319 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 ZNF765Q7L2R6 523 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 TAF8Q7Z7C8 310 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 RHOT1Q8IXI2 618 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.01□□□□□ -0.33
LIG1-212ENST00000596549 GPBAR1Q8TDU6 330 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 SCG3Q8WXD2 468 aaKnown RBP13.01□□□□□ -0.33
LIG1-212ENST00000596549 AP2M1Q96CW1 435 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 HIC2Q96JB3 615 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 ZNF830Q96NB3 372 aaPredicted RBP13.01□□□□□ -0.33
LIG1-212ENST00000596549 TRIB3Q96RU7 358 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 TRIM5Q9C035 493 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 POLR1BQ9H9Y6 1135 aa13.01□□□□□ -0.33
LIG1-212ENST00000596549 KCTD5Q9NXV2 234 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms