RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	TNFRSF10C	O14798	259 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	KDELR3	O43731	214 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	IGSF6	O95976	241 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CDK11B	P21127	795 aa	Known RBP	13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	STAT5A	P42229	794 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PPM1F	P49593	454 aa	Predicted RBP	13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	GEMIN4	P57678	1058 aa	Known RBP	13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	RHOA	P61586	193 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SQSTM1	Q13501	440 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	FAM72A	Q5TYM5	149 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TAF3	Q5VWG9	929 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	FAM72D	Q6L9T8	149 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TMEM71	Q6P5X7	295 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NLRP14	Q86W24	1093 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	FAM72B	Q86X60	149 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ZNF354C	Q86Y25	554 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NAGS	Q8N159	534 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TMEM35B	Q8NCS4	154 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TEFM	Q96QE5	360 aa	Known RBP	13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ERGIC2	Q96RQ1	377 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PDCL3	Q9H2J4	239 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NLRC4	Q9NPP4	1024 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	STAP1	Q9ULZ2	295 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	MFHAS1	Q9Y4C4	1052 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PLEKHM1	Q9Y4G2	1056 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	RPS6KL1	Q9Y6S9	549 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SHANK1	Q9Y566	2161 aa		13.75	□□□□□ -0.21
SHKBP1-208	ENST00000595726	HIVEP1	P15822	2718 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ZW10	O43264	779 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	BUB1B	O60566	1050 aa	Predicted RBP	13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	KATNA1	O75449	491 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	RFPL1	O75677	317 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	GFPT2	O94808	682 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	LSM8	O95777	96 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	MME	P08473	750 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	KEL	P23276	732 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SOX5	P35711	763 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TRIM23	P36406	574 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	FLT3	P36888	993 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ETFB	P38117	255 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	MMP12	P39900	470 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	STAT1	P42224	750 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	GNPDA1	P46926	289 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SNX16	P57768	344 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	UBXN1	Q04323	297 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CRTC2	Q53ET0	693 aa	Predicted RBP	13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	C2CD6	Q53TS8	623 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ERAP2	Q6P179	960 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CEACAM20	Q6UY09	585 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SLC20A1	Q8WUM9	679 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CFAP57	Q96MR6	1250 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NCAPG	Q9BPX3	1015 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TRIM55	Q9BYV6	548 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ZMYND15	Q9H091	742 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	MAGEH1	Q9H213	219 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SUV39H2	Q9H5I1	410 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	LUZP4	Q9P127	313 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	OR12D3	Q9UGF7	316 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NOCT	Q9UK39	431 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PCDHB3	Q9Y5E6	796 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	OAS3	Q9Y6K5	1087 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	F8	P00451	2351 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	AKAP9	Q99996	3911 aa		13.74	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CXorf51A	A0A1B0GTR3	108 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CDC14C	A4D256	554 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	RAMP2	O60895	175 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	DLGAP3	O95886	979 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CEACAM5	P06731	702 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	HOXC4	P09017	264 aa	Predicted RBP	13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ZNF28	P17035	718 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	RHOQ	P17081	205 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	GM2A	P17900	193 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	DLST	P36957	453 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	GABRB2	P47870	512 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	POLD2	P49005	469 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SUOX	P51687	545 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NOMO3	P69849	1222 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CTBS	Q01459	385 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ILF3	Q12906	894 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	RALGDS	Q12967	914 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CYTH1	Q15438	398 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PNCK	Q6P2M8	343 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ARHGAP22	Q7Z5H3	698 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ZNF677	Q86XU0	584 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CAMK1D	Q8IU85	385 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ZDHHC17	Q8IUH5	632 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NEK11	Q8NG66	645 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	GSDMC	Q9BYG8	508 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NOL6	Q9H6R4	1146 aa	Known RBP	13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	WDR26	Q9H7D7	661 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	FBXO8	Q9NRD0	319 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TMEM248	Q9NWD8	314 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	DONSON	Q9NYP3	566 aa		13.73	□□□□□ -0.21

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