RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 KLQ9UEF7 1012 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 PHTF1Q9UMS5 762 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 ENTPD2Q9Y5L3 495 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 HEMK1Q9Y5R4 338 aaPredicted RBP13.22□□□□□ -0.29
H3F3B-213ENST00000593254 DGKBQ9Y6T7 804 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 ZFC3H1O60293 1989 aaKnown RBP13.21□□□□□ -0.29
H3F3B-213ENST00000593254 PMS2P1A4D2B8 440 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 A8MX80 341 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 AKR1B10O60218 316 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 MFAP3LO75121 409 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 HEXIM1O94992 359 aaKnown RBP13.21□□□□□ -0.29
H3F3B-213ENST00000593254 PGLSO95336 258 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 HOXC4P09017 264 aaPredicted RBP13.21□□□□□ -0.29
H3F3B-213ENST00000593254 ALPIP09923 528 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 NFKBIAP25963 317 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 VIPR1P32241 457 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
H3F3B-213ENST00000593254 RPIAP49247 311 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 ACOX1Q15067 660 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 CNGA3Q16281 694 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 KCTD16Q68DU8 428 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 ALG1LQ6GMV1 187 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 LVRNQ6Q4G3 990 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 XKR5Q6UX68 686 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 MAP7D3Q8IWC1 876 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 PELI3Q8N2H9 469 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 CBARPQ8N350 705 aaPredicted RBP13.21□□□□□ -0.29
H3F3B-213ENST00000593254 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 KCTD6Q8NC69 237 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 NAT6Q93015 286 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 FATE1Q969F0 183 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 MCCC1Q96RQ3 725 aaPredicted RBP13.21□□□□□ -0.29
H3F3B-213ENST00000593254 RBM15Q96T37 977 aaKnown RBP eCLIP13.21□□□□□ -0.294e-9■■■■□ 19.9
H3F3B-213ENST00000593254 CHP1Q99653 195 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 FGF22Q9HCT0 170 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 NT5MQ9NPB1 228 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 ZNHIT6Q9NWK9 470 aaKnown RBP13.21□□□□□ -0.29
H3F3B-213ENST00000593254 PPIL1Q9Y3C6 166 aa13.21□□□□□ -0.29
H3F3B-213ENST00000593254 TMEM202A6NGA9 273 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 PSMD11O00231 422 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 TNFRSF10CO14798 259 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 MATN3O15232 486 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 SUV39H1O43463 412 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 FZD6O60353 706 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 MAP3K6O95382 1288 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 NTRK1P04629 796 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 TPM1P09493 284 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 CYP2A6P11509 494 aaPredicted RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 CTSEP14091 401 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 ITGB6P18564 788 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 LHCGRP22888 699 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 KELP23276 732 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 IFI16Q16666 785 aaKnown RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 TSR1Q2NL82 804 aaKnown RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 PERM1Q5SV97 790 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 ARMC12Q5T9G4 340 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 TIGD7Q6NT04 549 aaPredicted RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 PNCKQ6P2M8 343 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 RD3Q7Z3Z2 195 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 PQLC3Q8N755 202 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 ARL10Q8N8L6 244 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 RNF214Q8ND24 703 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 OR56A4Q8NGH8 313 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 TPCN2Q8NHX9 752 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 PIH1D2Q8WWB5 315 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 SCG3Q8WXD2 468 aaKnown RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 OR1E3Q8WZA6 343 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 NUS1Q96E22 293 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 SCRN2Q96FV2 425 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 TSGA13Q96PP4 275 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 CCNL2Q96S94 520 aaPredicted RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 SEMA3CQ99985 751 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 POLR1EQ9GZS1 481 aaKnown RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 WDR26Q9H7D7 661 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 KCTD5Q9NXV2 234 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 AMACRQ9UHK6 382 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 ATXN7L1Q9ULK2 861 aaPredicted RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 DOLKQ9UPQ8 538 aa13.2□□□□□ -0.3
H3F3B-213ENST00000593254 SPTBN1Q01082 2364 aaKnown RBP13.2□□□□□ -0.3
H3F3B-213ENST00000593254 NPIPB15A6NHN6 443 aaPredicted RBP13.19□□□□□ -0.3
H3F3B-213ENST00000593254 TCEA3O75764 348 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 MTA2O94776 668 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 TNFP01375 233 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 PDHA1P08559 390 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 CCNCP24863 283 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 GBE1Q04446 702 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 IHHQ14623 411 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 MESDQ14696 234 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 ATG14Q6ZNE5 492 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 RBM44Q6ZP01 1051 aaKnown RBP13.19□□□□□ -0.3
H3F3B-213ENST00000593254 USP45Q70EL2 814 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 HSD11B1LQ7Z5J1 315 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 GKN2Q86XP6 184 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 ARL14Q8N4G2 192 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 KYQ8NBH2 561 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 SLC35G2Q8TBE7 412 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 RAPGEF5Q92565 580 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 DTD2Q96FN9 168 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms