RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 DUSP3P51452 185 aaPredicted RBP27.2■■□□□ 1.94
SMAD4-213ENST00000591914 STC1P52823 247 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 CLDN6P56747 220 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 COPS2P61201 443 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 E2F1Q01094 437 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 CAMK2BQ13554 666 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 ELOCQ15369 112 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 SLC14A2Q15849 920 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 C6orf132Q5T0Z8 1188 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 BBS12Q6ZW61 710 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 RD3Q7Z3Z2 195 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 NT5DC3Q86UY8 548 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 SDR16C5Q8N3Y7 309 aa27.2■■□□□ 1.94
SMAD4-213ENST00000591914 RBM15Q96T37 977 aaKnown RBP eCLIP27.2■■□□□ 1.94
SMAD4-213ENST00000591914 CCDC66A2RUB6 948 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 GRID2IPA4D2P6 1211 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 ANKRD66B4E2M5 251 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 PDE2AO00408 941 aaPredicted RBP27.19■■□□□ 1.94
SMAD4-213ENST00000591914 GP1BAP07359 652 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 CTSEP14091 401 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 PTPN3P26045 913 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 CTNNA2P26232 953 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 QPCTQ16769 361 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 HES3Q5TGS1 186 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 LVRNQ6Q4G3 990 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 RFLNAQ6ZTI6 216 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 ZNF765Q7L2R6 523 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 HEATR4Q86WZ0 1026 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 RAVER1Q8IY67 606 aaKnown RBP27.19■■□□□ 1.94
SMAD4-213ENST00000591914 TEKT5Q96M29 485 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 TRIB3Q96RU7 358 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 ADGRE3Q9BY15 652 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 GLOD4Q9HC38 313 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 PHPT1Q9NRX4 125 aaPredicted RBP27.19■■□□□ 1.94
SMAD4-213ENST00000591914 EFR3BQ9Y2G0 817 aa27.19■■□□□ 1.94
SMAD4-213ENST00000591914 MTSS1O43312 755 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 TNFP01375 233 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 INSM1Q01101 510 aaPredicted RBP27.18■■□□□ 1.94
SMAD4-213ENST00000591914 WASHC5Q12768 1159 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 CDKN3Q16667 212 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 NLRP8Q86W28 1048 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 TXLNBQ8N3L3 684 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 ZCCHC14Q8WYQ9 949 aaKnown RBP27.18■■□□□ 1.94
SMAD4-213ENST00000591914 HAUS1Q96CS2 278 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 DESI2Q9BSY9 194 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 HEMGNQ9BXL5 484 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 ABCG8Q9H221 673 aa27.18■■□□□ 1.94
SMAD4-213ENST00000591914 MRPL40Q9NQ50 206 aaKnown RBP27.18■■□□□ 1.94
SMAD4-213ENST00000591914 SOD1P00441 154 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 JUPP14923 745 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 PTPN7P35236 360 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 CDK3Q00526 305 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 KIF5AQ12840 1032 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 RAET1GQ6H3X3 334 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 ZC3H18Q86VM9 953 aaKnown RBP27.17■■□□□ 1.94
SMAD4-213ENST00000591914 SLC35F3Q8IY50 421 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 NRSN1Q8IZ57 195 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 CACTIN-AS1Q8N1I8 211 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 GLMNQ92990 594 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 AP2M1Q96CW1 435 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 QKIQ96PU8 341 aaKnown RBP eCLIP27.17■■□□□ 1.946e-6■■■■□ 23.1
SMAD4-213ENST00000591914 HERPUD2Q9BSE4 406 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 MLPHQ9BV36 600 aaPredicted RBP27.17■■□□□ 1.94
SMAD4-213ENST00000591914 CD84Q9UIB8 345 aa27.17■■□□□ 1.94
SMAD4-213ENST00000591914 DMXL2Q8TDJ6 3036 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 EME2A4GXA9 379 aaPredicted RBP27.16■■□□□ 1.94
SMAD4-213ENST00000591914 GOLGA6L6A8MZA4 724 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 HACD1B0YJ81 288 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 APOC4-APOC2K7ER74 178 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 CLDN7O95471 211 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 APOC2P02655 101 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 RWDD2BP57060 319 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 NR0B2Q15466 257 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 GKN2Q86XP6 184 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 SPATA22Q8NHS9 363 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 IFI44Q8TCB0 444 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 SCG3Q8WXD2 468 aaKnown RBP27.16■■□□□ 1.94
SMAD4-213ENST00000591914 ALG3Q92685 438 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 SCAMP4Q969E2 229 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 FRMD8Q9BZ67 464 aaPredicted RBP27.16■■□□□ 1.94
SMAD4-213ENST00000591914 TRIM10Q9UDY6 481 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 ZMIZ1Q9ULJ6 1067 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 DOLKQ9UPQ8 538 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 KNTC1P50748 2209 aa27.16■■□□□ 1.94
SMAD4-213ENST00000591914 A0A0U1RQJ8 604 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 C1orf232A0A0U1RR37 186 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 PRSS38A1L453 326 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 MACROD2A1Z1Q3 448 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 GOLGA6CA6NDK9 693 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 GOLGA6BA6NDN3 693 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 OPA1O60313 960 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 CEACAM5P06731 702 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 GOLGA6DP0CG33 693 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 CD68P34810 354 aaPredicted RBP27.15■■□□□ 1.94
SMAD4-213ENST00000591914 RPIAP49247 311 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 XRCC4Q13426 336 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 GALNT3Q14435 633 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 TCEA2Q15560 299 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 GUSBP11Q6P575 273 aa27.15■■□□□ 1.94
SMAD4-213ENST00000591914 ADAMTSL4Q6UY14 1074 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms