RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TNFRSF10CO14798 259 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 OPA1O60313 960 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 MYCLP1P12525 358 aaPredicted RBP20.4■□□□□ 0.86
SS18-224ENST00000584083 PECAM1P16284 738 aaPredicted RBP20.4■□□□□ 0.86
SS18-224ENST00000584083 ZNF30P17039 623 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 TGM2P21980 687 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 CAMK2BQ13554 666 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 KCTD16Q68DU8 428 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 GUSBP11Q6P575 273 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 RFLNAQ6ZTI6 216 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 EFL1Q7Z2Z2 1120 aaKnown RBP20.4■□□□□ 0.86
SS18-224ENST00000584083 TECPR1Q7Z6L1 1165 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 NT5DC3Q86UY8 548 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 SDR16C5Q8N3Y7 309 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 EXD1Q8NHP7 514 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 MDM1Q8TC05 714 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 TFB1MQ8WVM0 346 aaKnown RBP20.4■□□□□ 0.86
SS18-224ENST00000584083 KRT35Q92764 455 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 P3H4Q92791 437 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 RBM15Q96T37 977 aaKnown RBP eCLIP20.4■□□□□ 0.86
SS18-224ENST00000584083 BOCQ9BWV1 1114 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 ADGRE3Q9BY15 652 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 CYP4F12Q9HCS2 524 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 IMPACTQ9P2X3 320 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 GULP1Q9UBP9 304 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 CD84Q9UIB8 345 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 CLCA2Q9UQC9 943 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 DGKBQ9Y6T7 804 aa20.4■□□□□ 0.86
SS18-224ENST00000584083 RP1P56715 2156 aa20.39■□□□□ 0.86
SS18-224ENST00000584083 KMT2BQ9UMN6 2715 aaPredicted RBP20.39■□□□□ 0.85
SS18-224ENST00000584083 hCG_1818297A0A087WSY0 165 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 GP1BAP07359 652 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 CDC25BP30305 580 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 GPR1P46091 355 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 VAV2P52735 878 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 PTSQ03393 145 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 LVRNQ6Q4G3 990 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 SLC35F3Q8IY50 421 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 KIAA1524Q8TCG1 905 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 MAPK15Q8TD08 544 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 HAUS1Q96CS2 278 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 AP2M1Q96CW1 435 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 MLPHQ9BV36 600 aaPredicted RBP20.39■□□□□ 0.85
SS18-224ENST00000584083 HEMGNQ9BXL5 484 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 TEX101Q9BY14 249 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 LACRTQ9GZZ8 138 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 SLC25A51Q9H1U9 297 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 ABCG8Q9H221 673 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 SUDS3Q9H7L9 328 aaPredicted RBP20.39■□□□□ 0.85
SS18-224ENST00000584083 SIRPGQ9P1W8 387 aa20.39■□□□□ 0.85
SS18-224ENST00000584083 C1orf232A0A0U1RR37 186 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 BTNL10A8MVZ5 291 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 ANKRD66B4E2M5 251 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 CLDN7O95471 211 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 MT-CO3P00414 261 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 STC1P52823 247 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 CDK3Q00526 305 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 DPTQ07507 201 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 ADCY2Q08462 1091 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 CYP4F3Q08477 520 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 GALNT3Q14435 633 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 PRKD1Q15139 912 aaPredicted RBP20.38■□□□□ 0.85
SS18-224ENST00000584083 PCSK7Q16549 785 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 QPCTQ16769 361 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 TEX44Q53QW1 395 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 KDELC2Q7Z4H8 507 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 TAF8Q7Z7C8 310 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 ZC3H18Q86VM9 953 aaKnown RBP20.38■□□□□ 0.85
SS18-224ENST00000584083 IMP4Q96G21 291 aaKnown RBP20.38■□□□□ 0.85
SS18-224ENST00000584083 GLOD4Q9HC38 313 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 PADI4Q9UM07 663 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 GPR34Q9UPC5 381 aa20.38■□□□□ 0.85
SS18-224ENST00000584083 PRSS38A1L453 326 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 EME2A4GXA9 379 aaPredicted RBP20.37■□□□□ 0.85
SS18-224ENST00000584083 GOLGA6L6A8MZA4 724 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 KRT37O76014 449 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 CAPNS1P04632 268 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 PTPN3P26045 913 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 CTNNA1P35221 906 aaKnown RBP20.37■□□□□ 0.85
SS18-224ENST00000584083 PPP2R5EQ16537 467 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 CCDC181Q5TID7 509 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 NRSN1Q8IZ57 195 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 SCAMP4Q969E2 229 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 TMEM168Q9H0V1 697 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 CARS2Q9HA77 564 aaKnown RBP20.37■□□□□ 0.85
SS18-224ENST00000584083 PCDHA3Q9Y5H8 950 aa20.37■□□□□ 0.85
SS18-224ENST00000584083 ARHGEF17Q96PE2 2063 aaPredicted RBP20.36■□□□□ 0.85
SS18-224ENST00000584083 SRRM3A6NNA2 597 aaPredicted RBP20.36■□□□□ 0.85
SS18-224ENST00000584083 PJA2O43164 708 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 MTSS1O43312 755 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 TEAD1P28347 426 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 COPS2P61201 443 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 ZNF765Q7L2R6 523 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 PROSER1Q86XN7 944 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 TMEM139Q8IV31 216 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 CACTIN-AS1Q8N1I8 211 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 ARL10Q8N8L6 244 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 DCBLD1Q8N8Z6 715 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 FAM46DQ8NEK8 389 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 SPATA22Q8NHS9 363 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms