RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	FAM237B	A0A1B0GVD1	139 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	CCDC78	A2IDD5	438 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	GOLGA8CP	A6NN73	597 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904		E7ESA3	106 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	SLC31A1	O15431	190 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	BUD23	O43709	281 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	PYGL	P06737	847 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	C1S	P09871	688 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	AKT2	P31751	481 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	SPAM1	P38567	509 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	ELK3	P41970	407 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	SPINT3	P49223	89 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZNF140	P52738	457 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	DCDC1	P59894	354 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	SLMAP	Q14BN4	828 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	LRRC14	Q15048	493 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	CDKN3	Q16667	212 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	MAP9	Q49MG5	647 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	SPDYC	Q5MJ68	293 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	WDR45B	Q5MNZ6	344 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	TSTD2	Q5T7W7	516 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	WDR93	Q6P2C0	686 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904		Q6ZVL8	140 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	CYP2U1	Q7Z449	544 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	ANKMY2	Q8IV38	441 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	PALM2	Q8IXS6	379 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	MPP5	Q8N3R9	675 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	FRMD1	Q8N878	549 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	FBXO36	Q8NEA4	188 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	ASB12	Q8WXK4	309 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZNF669	Q96BR6	464 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	BIRC7	Q96CA5	298 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	AP2M1	Q96CW1	435 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	CFAP36	Q96G28	342 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	DNAJC1	Q96KC8	554 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	COQ10A	Q96MF6	247 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	HSPA12B	Q96MM6	686 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	PWWP2A	Q96N64	755 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	EBNA1BP2	Q99848	306 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	LRFN3	Q9BTN0	628 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	KIFC1	Q9BW19	673 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	C1QTNF2	Q9BXJ5	285 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	EPC1	Q9H2F5	836 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	FAM83D	Q9H4H8	585 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	BPIFA1	Q9NP55	256 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	NLE1	Q9NVX2	485 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	IL17C	Q9P0M4	197 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	MBD1	Q9UIS9	605 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	RIMKLB	Q9ULI2	386 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZFR2	Q9UPR6	939 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	DMTF1	Q9Y222	760 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	COQ6	Q9Y2Z9	468 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	NCOR1	O75376	2440 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	MYO18A	Q92614	2054 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	GLYATL1P3	A0A0U1RQE8	302 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	LAT	O43561	262 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	BANF1	O75531	89 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	USP1	O94782	785 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	RHOBTB1	O94844	696 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	PAK4	O96013	591 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	BCKDHB	P21953	392 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	HNRNPA2B1	P22626	353 aa	Known RBP	12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	PTPN5	P54829	565 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	TMPRSS15	P98073	1019 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	MSLN	Q13421	630 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	ITGA9	Q13797	1035 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	AGER	Q15109	404 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	MSS51	Q4VC12	460 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	SPANXN3	Q5MJ09	141 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	ALS2CL	Q60I27	953 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZNF765	Q7L2R6	523 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	TMEFF1	Q8IYR6	380 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	CBARP	Q8N350	705 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZBTB44	Q8NCP5	570 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	DENND6B	Q8NEG7	585 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	OR13C4	Q8NGS5	318 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	OR6P1	Q8NGX9	317 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	NELL1	Q92832	810 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	KLK6	Q92876	244 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	SIGLEC10	Q96LC7	697 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	TTC25	Q96NG3	672 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZSCAN5A	Q9BUG6	496 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	SPATA16	Q9BXB7	569 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	CD84	Q9UIB8	345 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	TEX264	Q9Y6I9	313 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	SLC30A1	Q9Y6M5	507 aa		12.48	□□□□□ -0.41
ABCD4-223	ENST00000555904	KMT2E	Q8IZD2	1858 aa		12.47	□□□□□ -0.41
ABCD4-223	ENST00000555904	METTL12	A8MUP2	240 aa		12.47	□□□□□ -0.41
ABCD4-223	ENST00000555904	PRAMEF26	H0Y7S4	382 aa		12.47	□□□□□ -0.41
ABCD4-223	ENST00000555904	FPGT	O14772	594 aa		12.47	□□□□□ -0.41
ABCD4-223	ENST00000555904	SPAG6	O75602	509 aa		12.47	□□□□□ -0.41
ABCD4-223	ENST00000555904	PRAMEF1	O95521	474 aa		12.47	□□□□□ -0.41

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