RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SYTL2Q9HCH5 934 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 ACTR3BQ9P1U1 418 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 PHF24Q9UPV7 400 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 NYNRINQ9P2P1 1898 aaKnown RBP16.17■□□□□ 0.18
TUBB3-209ENST00000555609 PTPRDP23468 1912 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 MYLKQ15746 1914 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 TRIM64CA6NLI5 447 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 DRGXA6NNA5 263 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 TRPA1O75762 1119 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 RPP40O75818 363 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 MOCS2O96007 188 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 ATXN1LP0C7T5 689 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 LBPP18428 481 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 CDK9P50750 372 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 PLK1P53350 603 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 PRKCQQ04759 706 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 YWHAHQ04917 246 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 SLC10A7Q0GE19 358 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 RALGDSQ12967 914 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 NRF1Q16656 503 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 KIF19Q2TAC6 998 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 MTX3Q5HYI7 312 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 NHSL2Q5HYW2 709 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 HMBOX1Q6NT76 420 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 ERI1Q8IV48 349 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 DRAXINQ8NBI3 349 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 TNIP2Q8NFZ5 429 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 OLA1Q9NTK5 396 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 INTS10Q9NVR2 710 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 RSL24D1Q9UHA3 163 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 ZNF701M0R085 212 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 ANGPT2O15123 496 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 CD3EAPO15446 510 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 CDK14O94921 469 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 POMCP01189 267 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 GPIP06744 558 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 ALDOCP09972 364 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 IDO1P14902 403 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 CDH2P19022 906 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 YWHAQP27348 245 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 DSC2Q02487 901 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 NFE2Q16621 373 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 MS4A13Q5J8X5 152 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 NOMO2Q5JPE7 1267 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 CLEC6AQ6EIG7 209 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 OGFOD2Q6N063 350 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 AMIGO2Q86SJ2 522 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 PTGR2Q8N8N7 351 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 BRSK1Q8TDC3 778 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 ADAMTS16Q8TE57 1224 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 TWIST2Q8WVJ9 160 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 TFAP2CQ92754 450 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 EZH1Q92800 747 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 PPWD1Q96BP3 646 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 BTN2A3PQ96KV6 586 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 ZNF599Q96NL3 588 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 C9orf16Q9BUW7 83 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 NUSAP1Q9BXS6 441 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 TRIM54Q9BYV2 358 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 SEMA6AQ9H2E6 1030 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 NOL11Q9H8H0 719 aaKnown RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 SDR39U1Q9NRG7 319 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 OLAHQ9NV23 265 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 UXTQ9UBK9 157 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-209ENST00000555609 DNAJC15Q9Y5T4 150 aa16.16■□□□□ 0.18
TUBB3-209ENST00000555609 J3KR12 359 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 TRMUO75648 421 aaKnown RBP16.15■□□□□ 0.18
TUBB3-209ENST00000555609 UMPSP11172 480 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 KCNC1P48547 511 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 MAPKAPK2P49137 400 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 ARSDP51689 593 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 APLP1P51693 650 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 NME5P56597 212 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 SH3BP2P78314 561 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 PHYKPLQ8IUZ5 450 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 STAG3L4Q8TBR4 150 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 SOCS4Q8WXH5 440 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 PTERQ96BW5 349 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 BIRC8Q96P09 236 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 SLC29A1Q99808 456 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 AARSD1Q9BTE6 412 aaKnown RBP16.15■□□□□ 0.18
TUBB3-209ENST00000555609 POLR1EQ9GZS1 481 aaKnown RBP16.15■□□□□ 0.18
TUBB3-209ENST00000555609 ZCWPW1Q9H0M4 648 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 POLR3BQ9NW08 1133 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-209ENST00000555609 IL37Q9NZH6 218 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.15■□□□□ 0.18
TUBB3-209ENST00000555609 MAP10Q9P2G4 905 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
TUBB3-209ENST00000555609 NLRC5Q86WI3 1866 aa16.15■□□□□ 0.18
TUBB3-209ENST00000555609 A0A087WXM4 84 aa16.14■□□□□ 0.17
TUBB3-209ENST00000555609 DHRS12A0PJE2 317 aa16.14■□□□□ 0.17
TUBB3-209ENST00000555609 KERAO60938 352 aa16.14■□□□□ 0.17
TUBB3-209ENST00000555609 ZNF37AP17032 561 aaPredicted RBP16.14■□□□□ 0.17
TUBB3-209ENST00000555609 HDCP19113 662 aa16.14■□□□□ 0.17
TUBB3-209ENST00000555609 FASP25445 335 aa16.14■□□□□ 0.17
TUBB3-209ENST00000555609 PSMA4P25789 261 aaKnown RBP16.14■□□□□ 0.17
TUBB3-209ENST00000555609 TRIP4Q15650 581 aaPredicted RBP16.14■□□□□ 0.17
TUBB3-209ENST00000555609 TYSND1Q2T9J0 566 aa16.14■□□□□ 0.17
TUBB3-209ENST00000555609 GDF6Q6KF10 455 aaPredicted RBP16.14■□□□□ 0.17
TUBB3-209ENST00000555609 CYP2R1Q6VVX0 501 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms