RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 KRT37O76014 449 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 DNTTP04053 509 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 SLC1A2P43004 574 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 PPM1JQ5JR12 505 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 PDPK2PQ6A1A2 396 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 PACS1Q6VY07 963 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 SDCCAG8Q86SQ7 713 aaPredicted RBP10.19□□□□□ -0.78
NEK9-205ENST00000555405 ACVR1CQ8NER5 493 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 OR13J1Q8NGT2 312 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 FAM76AQ8TAV0 307 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 RLN3Q8WXF3 142 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 FATE1Q969F0 183 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 SIPA1Q96FS4 1042 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 TPSD1Q9BZJ3 242 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 IQCGQ9H095 443 aaKnown RBP10.19□□□□□ -0.78
NEK9-205ENST00000555405 CD93Q9NPY3 652 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 IQANK1A0A1B0GTG1 560 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 SLC31A1O15431 190 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 CD3EAPO15446 510 aaKnown RBP10.19□□□□□ -0.78
NEK9-205ENST00000555405 KRT38O76015 456 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 ASMTLO95671 621 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 AHSGP02765 367 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 SRFP11831 508 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 LHCGRP22888 699 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 AKT1P31749 480 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 TAF1AQ15573 450 aaPredicted RBP10.19□□□□□ -0.78
NEK9-205ENST00000555405 TEDDM1Q5T9Z0 273 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 SLC41A1Q8IVJ1 513 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 CLDN19Q8N6F1 224 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 STYXQ8WUJ0 223 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 EID2BQ96D98 161 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 SMC6Q96SB8 1091 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 C8orf33Q9H7E9 229 aaPredicted RBP10.19□□□□□ -0.78
NEK9-205ENST00000555405 ARNT2Q9HBZ2 717 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 ARHGEF3Q9NR81 526 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 CATSPERZQ9NTU4 200 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 SERGEFQ9UGK8 458 aa10.19□□□□□ -0.78
NEK9-205ENST00000555405 KIF26AQ9ULI4 1882 aaPredicted RBP10.19□□□□□ -0.78
NEK9-205ENST00000555405 TCRBV21S2A2A0A5A6 115 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 UPK3BL1B0FP48 263 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 UPK3BL2E5RIL1 263 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 OR1I1O60431 355 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 RPP40O75818 363 aaKnown RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 PRAMEF1O95521 474 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 DCNP07585 359 aaKnown RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 SNRPAP09012 282 aaKnown RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 COL9A1P20849 921 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 GRIA4P48058 902 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 COL19A1Q14993 1142 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 CHRNA6Q15825 494 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 PSAPL1Q6NUJ1 521 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 ZNF852Q6ZMS4 543 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 KIAA0907Q7Z7F0 614 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 TRIM74Q86UV6 250 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 PIANPQ8IYJ0 282 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 SCRN2Q96FV2 425 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 IQCF5A8MTL0 148 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 HTRA2O43464 458 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 SOCS5O75159 536 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 PAK4O96013 591 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 GLRBP48167 497 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 GRM3Q14832 879 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 MLF2Q15773 248 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 CST6Q15828 149 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 C16orf46Q6P387 395 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 DOK6Q6PKX4 331 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 MARK2Q7KZI7 788 aaKnown RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 EXOC3L1Q86VI1 746 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 PHTF2Q8N3S3 785 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 SKA2Q8WVK7 121 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 SLC44A1Q8WWI5 657 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 EXT2Q93063 718 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 SCYL1Q96KG9 808 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 HHIPQ96QV1 700 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 ROPN1BQ9BZX4 212 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 ROPN1Q9HAT0 212 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 MOCS1Q9NZB8 636 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 ANKRD12Q6UB98 2062 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 TRIM16O95361 564 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 ABHD2P08910 425 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 CHRM3P20309 590 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 NR1D1P20393 614 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 ARNTP27540 789 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 GCAP28676 217 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 SPRP35270 261 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 GP5P40197 560 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 KIR2DL1P43626 348 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 LIG3P49916 1009 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 RBM20Q5T481 1227 aaKnown RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 ALG1LQ6GMV1 187 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 MRNIPQ6NTE8 343 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 BRAT1Q6PJG6 821 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 HSD11B1LQ7Z5J1 315 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 DCLK2Q8N568 766 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 GPR26Q8NDV2 337 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 DCAKDQ8WVC6 231 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 SGF29Q96ES7 293 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 PPP1R16AQ96I34 528 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 ZNF641Q96N77 438 aaPredicted RBP10.18□□□□□ -0.78
NEK9-205ENST00000555405 TMEM245Q9H330 911 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms