RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 UBAP2Q5T6F2 1119 aaKnown RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 METTL21CQ5VZV1 264 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ZFP1Q6P2D0 407 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 MFSD7Q6UXD7 560 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 LIPIQ6XZB0 460 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 PLPPR4Q7Z2D5 763 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 PNPLA5Q7Z6Z6 429 aaPredicted RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 SETD3Q86TU7 594 aaPredicted RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 LCA5Q86VQ0 697 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 PTRH1Q86Y79 214 aaKnown RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 RHPN2Q8IUC4 686 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 PASD1Q8IV76 773 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 CDKL3Q8IVW4 592 aaPredicted RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 BRSK2Q8IWQ3 736 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 KIRREL3Q8IZU9 778 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 LRRC43Q8N309 656 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 CCDC33Q8N5R6 958 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 SLC4A11Q8NBS3 891 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 FBXO36Q8NEA4 188 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 CMASQ8NFW8 434 aaPredicted RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 DEPTORQ8TB45 409 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ZSCAN18Q8TBC5 510 aaPredicted RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 PPP4R1Q8TF05 950 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 E2F7Q96AV8 911 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ZBTB8AQ96BR9 441 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 RMDN1Q96DB5 314 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ZNF558Q96NG5 402 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 HAPLN3Q96S86 360 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 KCNK16Q96T55 309 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 TBCBQ99426 244 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 SERPINI1Q99574 410 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ADAM2Q99965 735 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ECSITQ9BQ95 431 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 C2orf40Q9H1Z8 148 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 IKZF4Q9H2S9 585 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 CWH43Q9H720 699 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 MRPL40Q9NQ50 206 aaKnown RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 DNAJC17Q9NVM6 304 aaKnown RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 SLC9A2Q9UBY0 812 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 SRPK3Q9UPE1 567 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 PLLPQ9Y342 182 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 TEX264Q9Y6I9 313 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 TRIOO75962 3097 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 CACNA1AO00555 2505 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 FAM186AA6NE01 2351 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 KIAA1671Q9BY89 1806 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 A0A0B4J269 797 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 A0A1W2PPM1 405 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TCRBV9S1A1TA0A576 114 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 MED19A0JLT2 244 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ARHGAP10A1A4S6 786 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 BCLAF3A2AJT9 711 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 C3orf70A6NLC5 250 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 H0Y3Z8 333 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 K7ERI5 159 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DDX39AO00148 427 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 MGEA5O60502 916 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 CCNT2O60583 730 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 CST8O60676 142 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 GLRA3O75311 464 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 SNNO75324 88 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 IL18RAPO95256 599 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 IFNB1P01574 187 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TNNC2P02585 160 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 LYNP07948 512 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 PDHA1P08559 390 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 PABPC4LP0CB38 370 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 MYL2P10916 166 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 KRT3P12035 628 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ANPEPP15144 967 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 FAHP16930 419 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 NAT1P18440 290 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 KDELR1P24390 212 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 PSMA2P25787 234 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 RPL22P35268 128 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 GARSP41250 739 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 SLC26A2P50443 739 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 STAT5BP51692 787 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 EIF3EP60228 445 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 FAM189BP81408 668 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TMPRSS15P98073 1019 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 OTUD4Q01804 1114 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 SLC25A11Q02978 314 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 BIRC2Q13490 618 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TDGQ13569 410 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 THOC5Q13769 683 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TFDP1Q14186 410 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DPYSL3Q14195 570 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 KCNJ11Q14654 390 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 NOMO1Q15155 1222 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 CRY1Q16526 586 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 LIN52Q52LA3 116 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 LRRC23Q53EV4 343 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TM4SF20Q53R12 229 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 BOLA3Q53S33 107 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 EFHC1Q5JVL4 640 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 C1orf146Q5VVC0 180 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 KIAA1841Q6NSI8 718 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 SLC39A4Q6P5W5 647 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DSTYKQ6XUX3 929 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms