RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 BIRC7Q96CA5 298 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 ZC3H10Q96K80 434 aaKnown RBP13.08□□□□□ -0.32
DDX11-227ENST00000544652 ORAI3Q9BRQ5 295 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 GPR63Q9BZJ6 419 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 FOXP3Q9BZS1 431 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 ANKZF1Q9H8Y5 726 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 MRM3Q9HC36 420 aaKnown RBP13.08□□□□□ -0.32
DDX11-227ENST00000544652 KCTD5Q9NXV2 234 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDX11-227ENST00000544652 A0A0C4DFX4 3053 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 HEATR9A2RTY3 570 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 IGLON5A6NGN9 336 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 FAM47DPA6NHR8 397 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 SDR42E2A6NKP2 422 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 C2orf81A6NN90 581 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 EIF3HO15372 352 aaKnown RBP eCLIP13.07□□□□□ -0.32
DDX11-227ENST00000544652 LPOP22079 712 aaPredicted RBP13.07□□□□□ -0.32
DDX11-227ENST00000544652 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 NUDT1P36639 197 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 SPINT3P49223 89 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 ZNF140P52738 457 aaPredicted RBP13.07□□□□□ -0.32
DDX11-227ENST00000544652 PLTPP55058 493 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 ARL4CP56559 192 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 SESN2P58004 480 aaPredicted RBP13.07□□□□□ -0.32
DDX11-227ENST00000544652 DCDC1P59894 354 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 RPL6Q02878 288 aaKnown RBP13.07□□□□□ -0.32
DDX11-227ENST00000544652 ACVR1Q04771 509 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 SRSF5Q13243 272 aaKnown RBP13.07□□□□□ -0.32
DDX11-227ENST00000544652 HIF1AQ16665 826 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 MSS51Q4VC12 460 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 PMS2CLQ68D20 193 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 NLRP9Q7RTR0 991 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 NLRP8Q86W28 1048 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 SLC41A1Q8IVJ1 513 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 NRSN1Q8IZ57 195 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 PDIK1LQ8N165 341 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 MPP5Q8N3R9 675 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 DTX3LQ8TDB6 740 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 STYXQ8WUJ0 223 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 LRRC39Q96DD0 335 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 DTD2Q96FN9 168 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 PWWP2AQ96N64 755 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
DDX11-227ENST00000544652 KIFC1Q9BW19 673 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 SLC17A9Q9BYT1 436 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 KCNH6Q9H252 994 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 EBF2Q9HAK2 575 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 SYBUQ9NX95 663 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 PKD2L2Q9NZM6 624 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 SOX13Q9UN79 622 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.07□□□□□ -0.32
DDX11-227ENST00000544652 TCAF1Q9Y4C2 921 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 ARL5AQ9Y689 179 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 TEX264Q9Y6I9 313 aa13.07□□□□□ -0.32
DDX11-227ENST00000544652 MAGEB16A2A368 324 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 H7C0S8 307 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 WNT9AO14904 365 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 LZTS3O60299 673 aaPredicted RBP13.06□□□□□ -0.32
DDX11-227ENST00000544652 RECQL5O94762 991 aaPredicted RBP13.06□□□□□ -0.32
DDX11-227ENST00000544652 CARSP49589 748 aaKnown RBP13.06□□□□□ -0.32
DDX11-227ENST00000544652 PTPN5P54829 565 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 DPTQ07507 201 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 DHX9Q08211 1270 aaKnown RBP13.06□□□□□ -0.32
DDX11-227ENST00000544652 TCF15Q12870 199 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 PLK5Q496M5 336 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 TSTD2Q5T7W7 516 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 RFLNAQ6ZTI6 216 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 Q6ZVL8 140 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 ZNF765Q7L2R6 523 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 TMEM135Q86UB9 458 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 TP53I13Q8NBR0 393 aaPredicted RBP13.06□□□□□ -0.32
DDX11-227ENST00000544652 DENND6BQ8NEG7 585 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 PPHLN1Q8NEY8 458 aaKnown RBP13.06□□□□□ -0.32
DDX11-227ENST00000544652 PRSS33Q8NF86 280 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 DNASE2BQ8WZ79 361 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 UBXN4Q92575 508 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 FOXJ1Q92949 421 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 CENPTQ96BT3 561 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 PLEKHG4BQ96PX9 1271 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 KLF6Q99612 283 aaPredicted RBP13.06□□□□□ -0.32
DDX11-227ENST00000544652 CDH19Q9H159 772 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 RAD18Q9NS91 495 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 TREX1Q9NSU2 369 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 NLE1Q9NVX2 485 aaPredicted RBP13.06□□□□□ -0.32
DDX11-227ENST00000544652 DMTF1Q9Y222 760 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 COQ6Q9Y2Z9 468 aa13.06□□□□□ -0.32
DDX11-227ENST00000544652 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 TDRD6O60522 2096 aaKnown RBP13.05□□□□□ -0.32
DDX11-227ENST00000544652 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 A0A1W2PPC4 97 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 PAK4O96013 591 aaPredicted RBP13.05□□□□□ -0.32
DDX11-227ENST00000544652 BPIP17213 487 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 HADHAP40939 763 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 ETV3P41162 512 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 CRADDP78560 199 aa13.05□□□□□ -0.32
DDX11-227ENST00000544652 MTM1Q13496 603 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms