RNA–Protein interactions for RNA: ENST00000543729.5

TRIM46-209, Transcript of tripartite motif containing 46, humanhuman

TSL 5 BASIC

Gene TRIM46, Length 1,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-209ENST00000543729 EPHX1P07099 455 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 IL12RB1P42701 662 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 MAPK8P45983 427 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 ATXN3P54252 364 aaPredicted RBP16.08■□□□□ 0.17
TRIM46-209ENST00000543729 BNIP1Q12981 228 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 SEPT7Q16181 437 aaKnown RBP16.08■□□□□ 0.17
TRIM46-209ENST00000543729 SPRED3Q2MJR0 410 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 FBXW10Q5XX13 1052 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 C22orf39Q6P5X5 142 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 CAPN12Q6ZSI9 719 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 CCNJLQ8IV13 435 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 C4orf33Q8N1A6 199 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 RYBPQ8N488 228 aaPredicted RBP16.08■□□□□ 0.17
TRIM46-209ENST00000543729 PCDH20Q8N6Y1 951 aaKnown RBP16.08■□□□□ 0.17
TRIM46-209ENST00000543729 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 HTR3CQ8WXA8 447 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 MTBPQ96DY7 904 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 CEP295Q9C0D2 2601 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 MLXIPLQ9NP71 852 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 MKS1Q9NXB0 559 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 NYNRINQ9P2P1 1898 aaKnown RBP16.08■□□□□ 0.17
TRIM46-209ENST00000543729 CYP8B1Q9UNU6 501 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 TTLL3Q9Y4R7 772 aa16.08■□□□□ 0.17
TRIM46-209ENST00000543729 USP24Q9UPU5 2620 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 EDDM13A0A1B0GTR0 161 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 A0A1W2PPM1 405 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 TTC34A8MYJ7 566 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 K7ERQ8 282 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 ATP5HO75947 161 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 IGSF6O95976 241 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 C1QAP02745 245 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 MT-ND3P03897 115 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 SERPINF2P08697 491 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 SNRPD1P62314 119 aaKnown RBP16.08■□□□□ 0.16
TRIM46-209ENST00000543729 ITKQ08881 620 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 SLC10A7Q0GE19 358 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 CGB2Q6NT52 195 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 CAND1Q86VP6 1230 aaKnown RBP16.08■□□□□ 0.16
TRIM46-209ENST00000543729 LRRC6Q86X45 466 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 ISG20Q96AZ6 181 aaKnown RBP16.08■□□□□ 0.16
TRIM46-209ENST00000543729 APOPT1Q96IL0 206 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 VAT1Q99536 393 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 SLC32A1Q9H598 525 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 ETNK1Q9HBU6 452 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 KLC4Q9NSK0 619 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 RBM22Q9NW64 420 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRIM46-209ENST00000543729 ZC3H7BQ9UGR2 993 aaKnown RBP16.08■□□□□ 0.16
TRIM46-209ENST00000543729 PHTF1Q9UMS5 762 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 USH1CQ9Y6N9 552 aa16.08■□□□□ 0.16
TRIM46-209ENST00000543729 CHD5Q8TDI0 1954 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 SMAD6O43541 496 aaKnown RBP16.07■□□□□ 0.16
TRIM46-209ENST00000543729 OPHN1O60890 802 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 NDUFS2O75306 463 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 DCTN3O75935 186 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 JCHAINP01591 159 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 DHRS4L1P0CG22 281 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 HLA-EP13747 358 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 CNTFP26441 200 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 ALDH3A1P30838 453 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 HNRNPA1L2Q32P51 320 aaKnown RBP16.07■□□□□ 0.16
TRIM46-209ENST00000543729 LVRNQ6Q4G3 990 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 IGDCC3Q8IVU1 814 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 DEFB119Q8N690 84 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 DEFB124Q8NES8 71 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 MAGEC3Q8TD91 643 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 MRGPRX1Q96LB2 322 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 SPATA13Q96N96 652 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 TNKS2Q9H2K2 1166 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 TMEM245Q9H330 911 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 ABCF3Q9NUQ8 709 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 KLHL8Q9P2G9 620 aaPredicted RBP16.07■□□□□ 0.16
TRIM46-209ENST00000543729 ACTL7AQ9Y615 435 aa16.07■□□□□ 0.16
TRIM46-209ENST00000543729 UPK3BL1B0FP48 263 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 UPK3BL2E5RIL1 263 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 RNF103O00237 685 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 APRTP07741 180 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 RAD51Q06609 339 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 FOXC1Q12948 553 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 EFTUD2Q15029 972 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRIM46-209ENST00000543729 CYTH1Q15438 398 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 SLC1A5Q15758 541 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 ZKSCAN8Q15776 578 aaPredicted RBP16.06■□□□□ 0.16
TRIM46-209ENST00000543729 KBTBD12Q3ZCT8 623 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 CYB5D1Q6P9G0 228 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 ZNF449Q6P9G9 518 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 KIAA1324Q6UXG2 1013 aaKnown RBP16.06■□□□□ 0.16
TRIM46-209ENST00000543729 SH2D5Q6ZV89 423 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 Q6ZVU0 165 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 DSG4Q86SJ6 1040 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 HDDC3Q8N4P3 179 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 ZNF366Q8N895 744 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 CCDC63Q8NA47 563 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 GSDMBQ8TAX9 411 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 MYO19Q96H55 970 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 HSPA12BQ96MM6 686 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 PSKH2Q96QS6 385 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 PAIP2Q9BPZ3 127 aaKnown RBP16.06■□□□□ 0.16
TRIM46-209ENST00000543729 NAT9Q9BTE0 207 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 TM6SF2Q9BZW4 377 aa16.06■□□□□ 0.16
TRIM46-209ENST00000543729 POLR1EQ9GZS1 481 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms