RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PABPC5Q96DU9 382 aaKnown RBP3.58□□□□□ -1.84
MDM2-227ENST00000540709 MAELQ96JY0 434 aaKnown RBP3.58□□□□□ -1.84
MDM2-227ENST00000540709 SCLT1Q96NL6 688 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 KCNN2Q9H2S1 579 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 PPP1R3EQ9H7J1 279 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 HINT3Q9NQE9 182 aaKnown RBP3.58□□□□□ -1.84
MDM2-227ENST00000540709 MCM9Q9NXL9 1143 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 ERVK-11Q9UQG0 969 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 LOXL2Q9Y4K0 774 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 A0A1W2PS18 150 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 NTN3O00634 580 aaPredicted RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 TSPAN4O14817 238 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 SERPINB2P05120 415 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 POLBP06746 335 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 CFC1BP0CG36 223 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 CFC1P0CG37 223 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 COX7A2P14406 83 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 MYOD1P15172 320 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 ANOS1P23352 680 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 RRM1P23921 792 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 CORO1AP31146 461 aaKnown RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 AMPHP49418 695 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 METAP2P50579 478 aaKnown RBP eCLIP3.57□□□□□ -1.84
MDM2-227ENST00000540709 HNRNPH2P55795 449 aaKnown RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 SREBF2Q12772 1141 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 FOXD4Q12950 439 aaPredicted RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 GPR68Q15743 365 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 SLC9B1Q4ZJI4 515 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 PDSS1Q5T2R2 415 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 STXBP5Q5T5C0 1151 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 GGNBP1Q5YKI7 109 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 METTL2BQ6P1Q9 378 aaKnown RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 DUS1LQ6P1R4 473 aaKnown RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 LRRTM4Q86VH4 590 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 KMT5CQ86Y97 462 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 CHERPQ8IWX8 916 aaKnown RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 SLC24A4Q8NFF2 622 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 OR2AK2Q8NG84 335 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 MAGEC3Q8TD91 643 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 WBP2Q969T9 261 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 ZBTB10Q96DT7 871 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 APOPT1Q96IL0 206 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 METTL2AQ96IZ6 378 aaKnown RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 H2AFJQ9BTM1 129 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 POLR3CQ9BUI4 534 aaPredicted RBP3.57□□□□□ -1.84
MDM2-227ENST00000540709 TKTL2Q9H0I9 626 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 PLEKHA5Q9HAU0 1116 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 VEZTQ9HBM0 779 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 PCDH9Q9HC56 1237 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 HCN3Q9P1Z3 774 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 A4GNTQ9UNA3 340 aa3.57□□□□□ -1.84
MDM2-227ENST00000540709 FAM72CH0Y354 149 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 PAK4O96013 591 aaPredicted RBP3.56□□□□□ -1.84
MDM2-227ENST00000540709 EGFP01133 1207 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 AMBPP02760 352 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 HNRNPA1P09651 372 aaKnown RBP eCLIP3.56□□□□□ -1.84
MDM2-227ENST00000540709 S1PR1P21453 382 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 PAFAH1B1P43034 410 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 ATP12AP54707 1039 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 GALNT2Q10471 571 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 CAMK1Q14012 370 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 COL28A1Q2UY09 1125 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 FAM72AQ5TYM5 149 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 FAM72DQ6L9T8 149 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 FAM72BQ86X60 149 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 CCDC13Q8IYE1 715 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 GRAPLQ8TC17 118 aaPredicted RBP3.56□□□□□ -1.84
MDM2-227ENST00000540709 PPM1EQ8WY54 764 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 HERVK_113Q902F9 699 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 ORAI1Q96D31 301 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 HVCN1Q96D96 273 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 ALG14Q96F25 216 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 DUX3Q96PT4 197 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 PCYT2Q99447 389 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 MAP3K20Q9NYL2 800 aaKnown RBP3.56□□□□□ -1.84
MDM2-227ENST00000540709 TCF19Q9Y242 345 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 OR2W1Q9Y3N9 320 aa3.56□□□□□ -1.84
MDM2-227ENST00000540709 GAGE10A6NGK3 116 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 TTC36A6NLP5 189 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 MAOAP21397 527 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 USP8P40818 1118 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 GLIPR1P48060 266 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 PPM1FP49593 454 aaPredicted RBP3.55□□□□□ -1.84
MDM2-227ENST00000540709 TERF1P54274 439 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 FOXM1Q08050 763 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 NEXNQ0ZGT2 675 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 FAM69AQ5T7M9 428 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 TXNDC8Q6A555 127 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 TRNP1Q6NT89 227 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 ZNF852Q6ZMS4 543 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 C1orf87Q8N0U7 546 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 ZCCHC10Q8TBK6 192 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 WBP1Q96G27 269 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 UBXN10Q96LJ8 280 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 UPF2Q9HAU5 1272 aaKnown RBP3.55□□□□□ -1.84
MDM2-227ENST00000540709 TMEM30AQ9NV96 361 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 DDX43Q9NXZ2 648 aaKnown RBP3.55□□□□□ -1.84
MDM2-227ENST00000540709 CEPT1Q9Y6K0 416 aa3.55□□□□□ -1.84
MDM2-227ENST00000540709 GOLGA6L9A6NEM1 432 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 SEC31AO94979 1220 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms