RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 USP37Q86T82 979 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TLK2Q86UE8 772 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PIGZQ86VD9 579 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 NAT16Q8N8M0 369 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 OR7A2PQ8NGA2 310 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ELMO3Q96BJ8 720 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ST6GAL2Q96JF0 529 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 C16orf70Q9BSU1 422 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 MCMBPQ9BTE3 642 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 C9orf16Q9BUW7 83 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PCIF1Q9H4Z3 704 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PDZD7Q9H5P4 517 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ITM2CQ9NQX7 267 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 NRBP2Q9NSY0 501 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 WBP1LQ9NX94 342 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 NPAP1Q9NZP6 1156 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ZC3H7BQ9UGR2 993 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 VWA7Q9Y334 891 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 HEATR9A2RTY3 570 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 PRORSD1PA6NEY8 169 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 H0Y858 1186 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 TRDMT1O14717 391 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 TRIM24O15164 1050 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 SLC22A2O15244 555 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 TLR3O15455 904 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 PDPK1O15530 556 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 SGTAO43765 313 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 GAS2O43903 313 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 GLRA3O75311 464 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 HSPA4LO95757 839 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 PRKCGP05129 697 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 AKR1A1P14550 325 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 CCND3P30281 292 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 CDKN2BP42772 138 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 HTR3AP46098 478 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 NSFP46459 744 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 BEX3Q00994 111 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 FPGSQ05932 587 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ZNF181Q2M3W8 571 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 C5orf22Q49AR2 442 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 TMEM198Q66K66 360 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 KRT39Q6A163 491 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 TXNRD3NBQ6F5E7 133 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 STXBP4Q6ZWJ1 553 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 MON1BQ7L1V2 547 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 C7orf57Q8NEG2 295 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 PHF10Q8WUB8 498 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 SEMA4DQ92854 862 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ASB2Q96Q27 587 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 C11orf70Q9BRQ4 267 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 BTBD2Q9BX70 525 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 GON7Q9BXV9 100 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 NIFKQ9BYG3 293 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 DSN1Q9H410 356 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ZNF385DQ9H6B1 395 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 MRPL40Q9NQ50 206 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 DIABLOQ9NR28 239 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 CHST12Q9NRB3 414 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ACOXLQ9NUZ1 547 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 OAZ3Q9UMX2 235 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 H3BRB1 525 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 INO80B-WBP1J3KQ70 363 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 CTDSP2O14595 271 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 EI24O14681 340 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 OR7A10O76100 309 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 RASAL1O95294 804 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 C7P10643 843 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 PRKAR2AP13861 404 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 CBLP22681 906 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 CCNCP24863 283 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ALDH4A1P30038 563 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 YWHAZP63104 245 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 DPYSL3Q14195 570 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 TARBP2Q15633 366 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ADPRMQ3LIE5 342 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ESCO2Q56NI9 601 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 CLVS2Q5SYC1 327 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 IRAK1BP1Q5VVH5 260 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 METTL2BQ6P1Q9 378 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 TIFABQ6ZNK6 161 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ZNF720Q7Z2F6 126 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 CNTD1Q8N815 330 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 VPS37AQ8NEZ2 397 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 TTLQ8NG68 377 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 OR10Z1Q8NGY1 313 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 LHFPL5Q8TAF8 219 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 HDAC2Q92769 488 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 FIZ1Q96SL8 496 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 KCTD14Q9BQ13 255 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 LIN7BQ9HAP6 207 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 POPDC2Q9HBU9 364 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ZBTB26Q9HCK0 441 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 PDLIM7Q9NR12 457 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 SMPD3Q9NY59 655 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 ERAP1Q9NZ08 941 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 BAG5Q9UL15 447 aa9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 WBP11Q9Y2W2 641 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-243ENST00000540387 MN1Q10571 1320 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 ZNF254O75437 659 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 DGAT1O75907 488 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms