RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 DUS2Q9NX74 493 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 RBMX2Q9Y388 322 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 KCTD3Q9Y597 815 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 HEATR9A2RTY3 570 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 OR51F1A6NGY5 319 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 MRASO14807 208 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CPB1P15086 417 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 HUNKP57058 714 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 TRAF2Q12933 501 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 UGP2Q16851 508 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 KIF19Q2TAC6 998 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 KIAA0930Q6ICG6 404 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 TTC9BQ8N6N2 239 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CATSPER1Q8NEC5 780 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 SUSD3Q96L08 255 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 POLR1BQ9H9Y6 1135 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 MRM3Q9HC36 420 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 INIPQ9NRY2 104 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 BLOC1S6Q9UL45 172 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 TDRD15B5MCY1 1934 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 NR5A2O00482 541 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 UBDO15205 165 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 ZBTB11O95625 1053 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CYBAP13498 195 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 OXTRP30559 389 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 GRK4P32298 578 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CD86P42081 329 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CLCN2P51788 898 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 DSC2Q02487 901 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 PIGFQ07326 219 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 PPP1R8Q12972 351 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 TECRLQ5HYJ1 363 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 TBCELQ5QJ74 424 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 OTUD3Q5T2D3 398 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 C16orf87Q6PH81 154 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 SCIMPQ6UWF3 145 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CYHR1Q6ZMK1 362 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 SPATA2LQ8IUW3 424 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CCDC117Q8IWD4 279 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 PGBD5Q8N414 524 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 LZTR1Q8N653 840 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 NUDT8Q8WV74 236 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 TRIB2Q92519 343 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 MYEOVQ96EZ4 313 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 SEPHS2Q99611 448 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 MRPL57Q9BQC6 102 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 NT5MQ9NPB1 228 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 MID2Q9UJV3 735 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 UBFD1O14562 309 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 TNPO2O14787 897 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 MAN1A2O60476 641 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 SLC4A1P02730 911 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 KPNA1P52294 538 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 CDKN2DP55273 166 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 CARM1Q86X55 608 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 RBM12BQ8IXT5 1001 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 PELI3Q8N2H9 469 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 SMYD1Q8NB12 490 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 SPPL2BQ8TCT7 592 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 IMP4Q96G21 291 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 SLC39A13Q96H72 371 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 C3orf30Q96M34 536 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 CXorf21Q9HAI6 301 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 CLK4Q9HAZ1 481 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 ABI2Q9NYB9 513 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 MARCH4Q9P2E8 410 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 THEGQ9P2T0 379 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 VTI1BQ9UEU0 232 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 A8MT66 165 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 PTPRCAPQ14761 206 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 AARS2Q5JTZ9 985 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 RTN4RL1Q86UN2 441 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 RASAL3Q86YV0 1011 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 MAGEE2Q8TD90 523 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 ASB9Q96DX5 294 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 ZNF597Q96LX8 424 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 OAZ3Q9UMX2 235 aa12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 MAGED1Q9Y5V3 778 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-208ENST00000539506 SOAT2O75908 522 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 UGT1A1P22309 533 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 UGT1A4P22310 534 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 UGT1A3P35503 534 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 UGT1A5P35504 534 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PRKAA2P54646 552 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 SH3BGRP55822 239 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 POU4F1Q01851 419 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 RHDQ02161 417 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 YWHAHQ04917 246 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 ZNF598Q86UK7 904 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PIM3Q86V86 326 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 CIR1Q86X95 450 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 DHFR2Q86XF0 187 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 KLHDC9Q8NEP7 349 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 DNAJB14Q8TBM8 379 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PTCD2Q8WV60 388 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 IGSF8Q969P0 613 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PSMG2Q969U7 264 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms