RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 ZNF578Q96N58 590 aaPredicted RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 ZNF830Q96NB3 372 aaPredicted RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 TSGA13Q96PP4 275 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 RNF157Q96PX1 679 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 GFM1Q96RP9 751 aaKnown RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 TEX101Q9BY14 249 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 HAUS2Q9NVX0 235 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 KCTD5Q9NXV2 234 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 DTLQ9NZJ0 730 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 PPIL1Q9Y3C6 166 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 HEY1Q9Y5J3 304 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 A0A0J9YYE9 177 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 KCNK1O00180 336 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 NTN3O00634 580 aaPredicted RBP14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 JCHAINP01591 159 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 TRBC1P01850 177 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 KRT1P04264 644 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 CEACAM5P06731 702 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 RBMS1P29558 406 aaKnown RBP14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 GPR1P46091 355 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 POLD2P49005 469 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 PDX1P52945 283 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 NIPAL4Q0D2K0 466 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 ALG1LQ6GMV1 187 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 TECPR1Q7Z6L1 1165 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 SPACA3Q8IXA5 215 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 RHOT2Q8IXI1 618 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 ZNF248Q8NDW4 579 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 LPCAT1Q8NF37 534 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 GPR156Q8NFN8 814 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 ARRDC2Q8TBH0 407 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 PTCD2Q8WV60 388 aaKnown RBP14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 SCAMP4Q969E2 229 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 AP2M1Q96CW1 435 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 HDAC11Q96DB2 347 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 TDRD1Q9BXT4 1180 aaKnown RBP14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 MAK16Q9BXY0 300 aaKnown RBP14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 ABCG8Q9H221 673 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 EPB41L5Q9HCM4 733 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 HYOU1Q9Y4L1 999 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 COL27A1Q8IZC6 1860 aaPredicted RBP14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 CACNA1GO43497 2377 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 RP1P56715 2156 aa14.26□□□□□ -0.13
RTN3P1-201ENST00000536295 A0A1W2PQM1 296 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 AKR1B15C9JRZ8 316 aaPredicted RBP14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 AGRPO00253 132 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 APOL1O14791 398 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 NOBOXO60393 691 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 DXOO77932 396 aaKnown RBP14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 FUCA1P04066 466 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 CA4P22748 312 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 CES1P23141 567 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 AK4P27144 223 aaPredicted RBP14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 CD86P42081 329 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 ARHGAP25P42331 645 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 DYNLT1P63172 113 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 PTSQ03393 145 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 AP1B1Q10567 949 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 ILF3Q12906 894 aaKnown RBP eCLIP14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 ZBTB17Q13105 803 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 C14orf28Q4W4Y0 310 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 SOWAHCQ53LP3 525 aaPredicted RBP14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 ODF2Q5BJF6 829 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 OGFOD3Q6PK18 319 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 NPNTQ6UXI9 565 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 B3GNT8Q7Z7M8 397 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 TRIM74Q86UV6 250 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 RFX6Q8HWS3 928 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 CCNJLQ8IV13 435 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 CNGA4Q8IV77 575 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 PLD5Q8N7P1 536 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 OR6C4Q8NGE1 309 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 FATE1Q969F0 183 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 GRAMD1AQ96CP6 724 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 GSDMCQ9BYG8 508 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 CEP41Q9BYV8 373 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 FRMD8Q9BZ67 464 aaPredicted RBP14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 FOXP3Q9BZS1 431 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 LRRN3Q9H3W5 708 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 PCDH9Q9HC56 1237 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 ASCL3Q9NQ33 180 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 THSD1Q9NS62 852 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 SPATS2LQ9NUQ6 558 aaKnown RBP14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 LRIT1Q9P2V4 623 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 AMACRQ9UHK6 382 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 SUFUQ9UMX1 484 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 TMEM98Q9Y2Y6 226 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 RNF215Q9Y6U7 377 aa14.25□□□□□ -0.13
RTN3P1-201ENST00000536295 CCDC187A0A096LP49 1063 aa14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 CAPN8A6NHC0 703 aa14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 C3orf70A6NLC5 250 aaPredicted RBP14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 D6RAR5 112 aa14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 CLDN7O95471 211 aa14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 SOD1P00441 154 aa14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 PRLP01236 227 aa14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 GLB1P16278 677 aa14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 ZNF30P17039 623 aa14.24□□□□□ -0.13
RTN3P1-201ENST00000536295 MAZP56270 477 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms