RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 EPHB1P54762 984 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 INHBCP55103 352 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 TAS2R40P59535 323 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 CDK3Q00526 305 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 DPTQ07507 201 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 ILF3Q12906 894 aaKnown RBP eCLIP8.9□□□□□ -0.99
COPB1-211ENST00000534234 EIF3IQ13347 325 aaKnown RBP8.9□□□□□ -0.99
COPB1-211ENST00000534234 HLTFQ14527 1009 aaKnown RBP eCLIP8.9□□□□□ -0.99
COPB1-211ENST00000534234 SLC18A3Q16572 532 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 IFI16Q16666 785 aaKnown RBP8.9□□□□□ -0.99
COPB1-211ENST00000534234 ZSCAN23Q3MJ62 389 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 C14orf28Q4W4Y0 310 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 ZFYVE27Q5T4F4 411 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 NCBP2-AS2Q69YL0 99 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 SPECC1LQ69YQ0 1117 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 RAET1GQ6H3X3 334 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 TIGD7Q6NT04 549 aaPredicted RBP8.9□□□□□ -0.99
COPB1-211ENST00000534234 RAB11FIP2Q7L804 512 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 TECPR1Q7Z6L1 1165 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 CCNJLQ8IV13 435 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 FBXO39Q8N4B4 442 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 OR8K1Q8NGG5 319 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 KIAA1524Q8TCG1 905 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 GPBAR1Q8TDU6 330 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 LRRN4Q8WUT4 740 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 SLC39A7Q92504 469 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.99
COPB1-211ENST00000534234 LIN37Q96GY3 246 aaPredicted RBP8.9□□□□□ -0.99
COPB1-211ENST00000534234 TMEM74Q96NL1 305 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 TSGA13Q96PP4 275 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 SMIM14Q96QK8 99 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 ZNF670Q9BS34 389 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 PACSIN1Q9BY11 444 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 FRMD8Q9BZ67 464 aaPredicted RBP8.9□□□□□ -0.99
COPB1-211ENST00000534234 STRADBQ9C0K7 418 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 CPNE5Q9HCH3 593 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 EPB41L5Q9HCM4 733 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 SPATS2LQ9NUQ6 558 aaKnown RBP8.9□□□□□ -0.99
COPB1-211ENST00000534234 RBM22Q9NW64 420 aaKnown RBP eCLIP8.9□□□□□ -0.99
COPB1-211ENST00000534234 TRNAU1APQ9NX07 287 aaKnown RBP8.9□□□□□ -0.99
COPB1-211ENST00000534234 CD84Q9UIB8 345 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 TTLL3Q9Y4R7 772 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 RNF215Q9Y6U7 377 aa8.9□□□□□ -0.99
COPB1-211ENST00000534234 IGSF10Q6WRI0 2623 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 A0A0J9YYE9 177 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 TK2O00142 265 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 NUDT21O43809 227 aaKnown RBP8.89□□□□□ -0.99
COPB1-211ENST00000534234 TRBC1P01850 177 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 FGF1P05230 155 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 ITGA2BP08514 1039 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 PNLIPP16233 465 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 PTMSP20962 102 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 TEAD1P28347 426 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 UGT1A5P35504 534 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 GPR1P46091 355 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 GNPDA1P46926 289 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 TMPRSS3P57727 454 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 SKOR1P84550 965 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 DSC2Q02487 901 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 PTSQ03393 145 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 SLC10A2Q12908 348 aaPredicted RBP8.89□□□□□ -0.99
COPB1-211ENST00000534234 IHHQ14623 411 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 ARHGAP40Q5TG30 622 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 LRRC66Q68CR7 880 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 ALG1LQ6GMV1 187 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 RFLNAQ6ZTI6 216 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 NRROSQ86YC3 692 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 PQLC3Q8N755 202 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 LSM14AQ8ND56 463 aaKnown RBP8.89□□□□□ -0.99
COPB1-211ENST00000534234 CCNYQ8ND76 341 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 ARRDC2Q8TBH0 407 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 PTCD2Q8WV60 388 aaKnown RBP8.89□□□□□ -0.99
COPB1-211ENST00000534234 MAML1Q92585 1016 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 SCAMP4Q969E2 229 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 AP2M1Q96CW1 435 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 GSDMCQ9BYG8 508 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 ABCG8Q9H221 673 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 DEF6Q9H4E7 631 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 HAUS2Q9NVX0 235 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 AMACRQ9UHK6 382 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 LCMT1Q9UIC8 334 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 ATXN7L1Q9ULK2 861 aaPredicted RBP8.89□□□□□ -0.99
COPB1-211ENST00000534234 SUFUQ9UMX1 484 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 CHKBQ9Y259 395 aa8.89□□□□□ -0.99
COPB1-211ENST00000534234 SSU72P8A0A1W2PR75 194 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 B4GAT1O43505 415 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 AKR1B10O60218 316 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 PRLP01236 227 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 PRB1P04280 392 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 TMEM253P0C7T8 217 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 JMJD7P0C870 316 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 HGFP14210 728 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 ZNF30P17039 623 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 MX2P20592 715 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 KDELR1P24390 212 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 AK4P27144 223 aaPredicted RBP8.88□□□□□ -0.99
COPB1-211ENST00000534234 ALDH4A1P30038 563 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 SLC5A2P31639 672 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 CCKBRP32239 447 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 ADCY8P40145 1251 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms