RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 ERCC2P18074 760 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 AMPD1P23109 780 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 PSMA2P25787 234 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 TRIM23P36406 574 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ADCY8P40145 1251 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ACTR1BP42025 376 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 GPR1P46091 355 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 CCR10P46092 362 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 SUOXP51687 545 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ZNF143P52747 638 aaPredicted RBP6.57□□□□□ -1.36
CD44-221ENST00000526000 LIMK2P53671 638 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 POLE2P56282 527 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ACTR1AP61163 376 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 MAXP61244 160 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 SLC10A7Q0GE19 358 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ILF3Q12906 894 aaKnown RBP eCLIP6.57□□□□□ -1.36
CD44-221ENST00000526000 KCNAB2Q13303 367 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 NFATC2Q13469 925 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 KRT31Q15323 416 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 SYCP1Q15431 976 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 CNGA3Q16281 694 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 PPP6R3Q5H9R7 873 aaPredicted RBP6.57□□□□□ -1.36
CD44-221ENST00000526000 FKBP15Q5T1M5 1219 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 AFMIDQ63HM1 303 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 RAET1GQ6H3X3 334 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 BORAQ6PGQ7 559 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 XKR5Q6UX68 686 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 DPPA4Q7L190 304 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 KDELC2Q7Z4H8 507 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 TSPAN33Q86UF1 283 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 HEATR4Q86WZ0 1026 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ZNF677Q86XU0 584 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ARHGAP12Q8IWW6 846 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 NAGSQ8N159 534 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ARFGAP1Q8N6T3 406 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 KIAA1524Q8TCG1 905 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 HCAR2Q8TDS4 363 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 GPBAR1Q8TDU6 330 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 NCSTNQ92542 709 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 TMEM159Q96B96 161 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 NUS1Q96E22 293 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 AHCYL2Q96HN2 611 aaKnown RBP6.57□□□□□ -1.36
CD44-221ENST00000526000 TUBGCP5Q96RT8 1024 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 AGAP2Q99490 1192 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 AGPAT1Q99943 283 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 SEMA3CQ99985 751 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 CNPY3Q9BT09 278 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 GSDMCQ9BYG8 508 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 TRIM7Q9C029 511 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 RETREG1Q9H6L5 497 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 LRRC19Q9H756 370 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 APMAPQ9HDC9 416 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 PHPT1Q9NRX4 125 aaPredicted RBP6.57□□□□□ -1.36
CD44-221ENST00000526000 FANCLQ9NW38 375 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 KCNK4Q9NYG8 393 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ACSL6Q9UKU0 697 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 AP4E1Q9UPM8 1137 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 PLAAQ9Y263 795 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 MRPS18BQ9Y676 258 aaKnown RBP6.57□□□□□ -1.36
CD44-221ENST00000526000 NBASA2RRP1 2371 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 COL27A1Q8IZC6 1860 aaPredicted RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 IGHV1OR21-1A0A087WYE8 117 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 CXorf51AA0A1B0GTR3 108 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 LGALS16A8MUM7 142 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 K7EM74 188 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 PDE2AO00408 941 aaPredicted RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 TRAFD1O14545 582 aaPredicted RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 MTSS1O43312 755 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 HEXIM1O94992 359 aaKnown RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 MAP3K6O95382 1288 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 EML2O95834 649 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 CSF2RBP32927 897 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 NDST2P52849 883 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 COPB1P53618 953 aaKnown RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 JAM2P57087 298 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 POLR2LP62875 67 aaKnown RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 ITKQ08881 620 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 LBRQ14739 615 aaKnown RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 GRM3Q14832 879 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 AGERQ15109 404 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 DCAF12Q5T6F0 453 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 ERMARDQ5T6L9 678 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 ACAD10Q6JQN1 1059 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 SARM1Q6SZW1 724 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 TRIM72Q6ZMU5 477 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 MON1BQ7L1V2 547 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 TIPARPQ7Z3E1 657 aaKnown RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 PHF13Q86YI8 300 aaPredicted RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 MCOLN2Q8IZK6 566 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 PGBD5Q8N414 524 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 NPWQ8N729 165 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 C3orf20Q8ND61 904 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 AGBL5Q8NDL9 886 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 NEK11Q8NG66 645 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 ZNF564Q8TBZ8 553 aaPredicted RBP6.56□□□□□ -1.36
CD44-221ENST00000526000 LRRN4Q8WUT4 740 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 SCAMP4Q969E2 229 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 ECHDC3Q96DC8 303 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 ELMO2Q96JJ3 720 aa6.56□□□□□ -1.36
CD44-221ENST00000526000 COQ10AQ96MF6 247 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms