RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 MCOLN2Q8IZK6 566 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 CACNA2D3Q8IZS8 1091 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 NAGSQ8N159 534 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 AGBL5Q8NDL9 886 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 CCDC112Q8NEF3 446 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 SNRNP25Q9BV90 132 aaKnown RBP25.89■■□□□ 1.74
PVT1-219ENST00000523427 TEX101Q9BY14 249 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 FRMD8Q9BZ67 464 aaPredicted RBP25.89■■□□□ 1.74
PVT1-219ENST00000523427 B3GNT4Q9C0J1 378 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 TRNAU1APQ9NX07 287 aaKnown RBP25.89■■□□□ 1.74
PVT1-219ENST00000523427 OCIAD1Q9NX40 245 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 KCNK4Q9NYG8 393 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 ST14Q9Y5Y6 855 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 FLNCQ14315 2725 aa25.89■■□□□ 1.73
PVT1-219ENST00000523427 VIPR1P32241 457 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 ADCY8P40145 1251 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 ACTR1BP42025 376 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 ACTR1AP61163 376 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 CDK3Q00526 305 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 RFTN1Q14699 578 aaPredicted RBP25.88■■□□□ 1.73
PVT1-219ENST00000523427 LBRQ14739 615 aaKnown RBP25.88■■□□□ 1.73
PVT1-219ENST00000523427 SNAP47Q5SQN1 464 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 ERMARDQ5T6L9 678 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 ACAD10Q6JQN1 1059 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 ZNF564Q8TBZ8 553 aaPredicted RBP25.88■■□□□ 1.73
PVT1-219ENST00000523427 ENOX1Q8TC92 643 aaKnown RBP25.88■■□□□ 1.73
PVT1-219ENST00000523427 PEBP4Q96S96 227 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 TAS2R14Q9NYV8 317 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 PCDHGA3Q9Y5H0 932 aa25.88■■□□□ 1.73
PVT1-219ENST00000523427 EFCAB7A8K855 629 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 A8MU76 341 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 ATMINO43313 823 aaPredicted RBP25.87■■□□□ 1.73
PVT1-219ENST00000523427 RAD1O60671 282 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 HEXIM1O94992 359 aaKnown RBP25.87■■□□□ 1.73
PVT1-219ENST00000523427 CPP00450 1065 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 CSF2RBP32927 897 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 GPR3P46089 330 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 CCR10P46092 362 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 RENBPP51606 427 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 ZNF235Q14590 738 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 CDKAL1Q5VV42 579 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 Q6ZVL8 140 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 MARK2Q7KZI7 788 aaKnown RBP25.87■■□□□ 1.73
PVT1-219ENST00000523427 OR4D9Q8NGE8 314 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 DTD2Q96FN9 168 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 PSKH2Q96QS6 385 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 EPN3Q9H201 632 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 ADNPQ9H2P0 1102 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 FANCLQ9NW38 375 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 CD84Q9UIB8 345 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 TMEM98Q9Y2Y6 226 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 NBASA2RRP1 2371 aa25.87■■□□□ 1.73
PVT1-219ENST00000523427 IGHV1OR21-1A0A087WYE8 117 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 A0A0U1RQS6 177 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.86■■□□□ 1.73
PVT1-219ENST00000523427 PRKAR1AP10644 381 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 COPB1P53618 953 aaKnown RBP25.86■■□□□ 1.73
PVT1-219ENST00000523427 NR1D2Q14995 579 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 IGFBP7Q16270 282 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 CLPPQ16740 277 aaPredicted RBP25.86■■□□□ 1.73
PVT1-219ENST00000523427 TMCO4Q5TGY1 634 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 ANKS6Q68DC2 871 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 ARFGAP1Q8N6T3 406 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 FNIP1Q8TF40 1166 aa25.86■■□□□ 1.73
PVT1-219ENST00000523427 ZNF71Q9NQZ8 489 aaPredicted RBP25.86■■□□□ 1.73
PVT1-219ENST00000523427 NKX2-8O15522 239 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 THRAP10827 490 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 CTPS1P17812 591 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 LHCGRP22888 699 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 UBXN1Q04323 297 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 MAMLD1Q13495 774 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 TRA2AQ13595 282 aaKnown RBP eCLIP25.85■■□□□ 1.73
PVT1-219ENST00000523427 RFLNAQ6ZTI6 216 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 TSPAN33Q86UF1 283 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 TRIM74Q86UV6 250 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 AHCYL2Q96HN2 611 aaKnown RBP25.85■■□□□ 1.73
PVT1-219ENST00000523427 CTRCQ99895 268 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 CDH19Q9H159 772 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 NOD2Q9HC29 1040 aa25.85■■□□□ 1.73
PVT1-219ENST00000523427 NPIPB15A6NHN6 443 aaPredicted RBP25.84■■□□□ 1.73
PVT1-219ENST00000523427 PRPSAP2O60256 369 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 CYP2A6P11509 494 aaPredicted RBP25.84■■□□□ 1.73
PVT1-219ENST00000523427 TNFAIP3P21580 790 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 GPR1P46091 355 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 MAXP61244 160 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 CT47A1Q5JQC4 288 aaPredicted RBP25.84■■□□□ 1.73
PVT1-219ENST00000523427 DCAF12Q5T6F0 453 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 UNC5BQ8IZJ1 945 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 DDA1Q9BW61 102 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 ASPSCR1Q9BZE9 553 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 PARVAQ9NVD7 372 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 CWC15Q9P013 229 aaKnown RBP25.84■■□□□ 1.73
PVT1-219ENST00000523427 ANKMY1Q9P2S6 941 aa25.84■■□□□ 1.73
PVT1-219ENST00000523427 ZNF891A8MT65 544 aaPredicted RBP25.83■■□□□ 1.73
PVT1-219ENST00000523427 HTRA2O43464 458 aaPredicted RBP25.83■■□□□ 1.73
PVT1-219ENST00000523427 RNF8O76064 485 aa25.83■■□□□ 1.73
PVT1-219ENST00000523427 MIPP30301 263 aa25.83■■□□□ 1.73
PVT1-219ENST00000523427 TRAF2Q12933 501 aa25.83■■□□□ 1.73
PVT1-219ENST00000523427 PGBD5Q8N414 524 aa25.83■■□□□ 1.73
PVT1-219ENST00000523427 OR2M4Q96R27 311 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms