RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 CBFA2T2O43439 604 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 MFSD11O43934 449 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 SOCS5O75159 536 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 PGLSO95336 258 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 TPM3P06753 285 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 PDHA1P08559 390 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 HOXC4P09017 264 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 MYCLP1P12525 358 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 TNNT1P13805 278 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 CR2P20023 1033 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 ALDH4A1P30038 563 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 TRIM23P36406 574 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 GPR1P46091 355 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 ZNF75DP51815 510 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 INHBCP55103 352 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 TAS2R40P59535 323 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 DSC2Q02487 901 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 DPYSL3Q14195 570 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 MESDQ14696 234 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 TSR1Q2NL82 804 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 TAF1BQ53T94 588 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 ANKRD20A8PQ5CZ79 823 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 PHF19Q5T6S3 580 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 SPECC1LQ69YQ0 1117 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 SLC30A9Q6PML9 568 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 USP53Q70EK8 1073 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 USP45Q70EL2 814 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 MARK2Q7KZI7 788 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 RAB11FIP2Q7L804 512 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 CCNJLQ8IV13 435 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 MAP7D3Q8IWC1 876 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 NDUFAF2Q8N183 169 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 NIPA2Q8N8Q9 360 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 GPR156Q8NFN8 814 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 OR6C4Q8NGE1 309 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 ZDHHC1Q8WTX9 485 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 CTNNBL1Q8WYA6 563 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 GRAMD1AQ96CP6 724 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 SCRN2Q96FV2 425 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 MGME1Q9BQP7 344 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 PACSIN1Q9BY11 444 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 ZNHIT6Q9NWK9 470 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 SUFUQ9UMX1 484 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 CHKBQ9Y259 395 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 PLEKHM1Q9Y4G2 1056 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.23□□□□□ -0.776e-7■■□□□ 12.7
CTNNA1-235ENST00000522730 ATMQ13315 3056 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 CFAP46Q8IYW2 2715 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 SHROOM3Q8TF72 1996 aa10.23□□□□□ -0.77
CTNNA1-235ENST00000522730 RHPN2P1A8MT19 583 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 TMX2-CTNND1H3BSU7 103 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 NTN3O00634 580 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 PLD2O14939 933 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 MATN3O15232 486 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 INPP4BO15327 924 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 AKR1B10O60218 316 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 NOBOXO60393 691 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 DXOO77932 396 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 PROSCO94903 275 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 ASMTLO95671 621 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 JCHAINP01591 159 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 FUCA1P04066 466 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 CEACAM5P06731 702 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 H2AFZP0C0S5 128 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 JMJD7P0C870 316 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 CCNB1P14635 433 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 GLB1P16278 677 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 LHCGRP22888 699 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 AK4P27144 223 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 UGT1A5P35504 534 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 GARSP41250 739 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 MAZP56270 477 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 TMPRSS3P57727 454 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 OR1D5P58170 312 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 CDK3Q00526 305 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 GBE1Q04446 702 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 ILF3Q12906 894 aaKnown RBP eCLIP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 IFI16Q16666 785 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 C14orf28Q4W4Y0 310 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 LRRC66Q68CR7 880 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 NCBP2-AS2Q69YL0 99 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 OGFOD3Q6PK18 319 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 H2AFVQ71UI9 128 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 KDELC2Q7Z4H8 507 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 TRIM74Q86UV6 250 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 PIH1D2Q8WWB5 315 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 SCAMP4Q969E2 229 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 AP2M1Q96CW1 435 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 IQCDQ96DY2 449 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 DTD2Q96FN9 168 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 MAK16Q9BXY0 300 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 TEX101Q9BY14 249 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 GSDMCQ9BYG8 508 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 DPH1Q9BZG8 443 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 POLR1EQ9GZS1 481 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 ABCG8Q9H221 673 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 PISDQ9UG56 409 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 PCDHGA8Q9Y5G5 932 aa10.22□□□□□ -0.77
CTNNA1-235ENST00000522730 HEY1Q9Y5J3 304 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms