RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RETP07949 1114 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 AKT2P31751 481 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 CSNK1EP49674 416 aaKnown RBP9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 SESN2P58004 480 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 CRADDP78560 199 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 FOXK1P85037 733 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 TMPRSS15P98073 1019 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 BNC1Q01954 994 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 LMNB2Q03252 620 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 PTSQ03393 145 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 KCNJ11Q14654 390 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 SMAD1Q15797 465 aaKnown RBP9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 CCDC38Q502W7 563 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 TRIM61Q5EBN2 209 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 SPDYCQ5MJ68 293 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 CERCAMQ5T4B2 595 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 PEAR1Q5VY43 1037 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 IZUMO3Q5VZ72 239 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 ZNF572Q7Z3I7 529 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 SYT12Q8IV01 421 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 DNAAF3Q8N9W5 541 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 TMEM145Q8NBT3 493 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 OR13H1Q8NG92 308 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 SCAMP4Q969E2 229 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 BMFQ96LC9 184 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 PPP1R2P1Q96PQ5 205 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 LYSMD1Q96S90 227 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 DPH5Q9H2P9 285 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 RXFP3Q9NSD7 469 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 PCYOX1Q9UHG3 505 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 DMTF1Q9Y222 760 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 OR1A2Q9Y585 309 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 ZNF106Q9H2Y7 1883 aaKnown RBP9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 OTOGLQ3ZCN5 2332 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 A0A1B0GTW7 788 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 A0A1W2PR77 199 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 PROB1E7EW31 1015 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 PRAMEF26H0Y7S4 382 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 SCAMP1O15126 338 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 GFRA3O60609 400 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 BANF1O75531 89 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 SUN1O94901 812 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 EPOP01588 193 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 GNSP15586 552 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 ZNF30P17039 623 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 BPIP17213 487 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 NFKBIAP25963 317 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 ADCY8P40145 1251 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 SPINT3P49223 89 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 GRIK2Q13002 908 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 LRRC14Q15048 493 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 TCEA2Q15560 299 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 PLA2G2CQ5R387 149 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 PRAMEF14Q5SWL7 426 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 RAET1GQ6H3X3 334 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 TECPR1Q7Z6L1 1165 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 TRIM74Q86UV6 250 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 SLC22A18ASQ8N1D0 253 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 NOA1Q8NC60 698 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 GPR26Q8NDV2 337 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 OR13C4Q8NGS5 318 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 SLCO2A1Q92959 643 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 FUBP1Q96AE4 644 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 MRRFQ96E11 262 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 LOXL4Q96JB6 756 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 PWWP2AQ96N64 755 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 TRIM56Q9BRZ2 755 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 RIOK2Q9BVS4 552 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 GTPBP2Q9BX10 602 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 CARD6Q9BX69 1037 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 ABCG8Q9H221 673 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 SUDS3Q9H7L9 328 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 MAGEE1Q9HCI5 957 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 ARFGAP3Q9NP61 516 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 CASS4Q9NQ75 786 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 EIF2B3Q9NR50 452 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 PCDHGA5Q9Y5G8 931 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 ZFHX2Q9C0A1 2572 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 DNAH14Q0VDD8 3507 aa9.78□□□□□ -0.84
TOPBP1-209ENST00000513818 DMXL1Q9Y485 3027 aa9.77□□□□□ -0.84
TOPBP1-209ENST00000513818 A6NNZ2 444 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 EFCAB8A8MWE9 144 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 FADS2P1A8MWK0 482 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 PSMD11O00231 422 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 DNALI1O14645 258 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 FPGTO14772 594 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 INPP4BO15327 924 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 PSMD3O43242 534 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF500O60304 480 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 AVILO75366 819 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 SOD1P00441 154 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 TUBB4AP04350 444 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 THEGLP0DJG4 465 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 TPSB2P20231 275 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 MGAT1P26572 445 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 CD38P28907 300 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 CA5AP35218 305 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 RPL21P46778 160 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms