RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TEX101Q9BY14 249 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 DPEP2Q9H4A9 486 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 ZWILCHQ9H900 591 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 PISDQ9UG56 409 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 LOXL2Q9Y4K0 774 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 BZW2Q9Y6E2 419 aaKnown RBP18.54■□□□□ 0.56
PRKCB-209ENST00000498058 PIEZO2Q9H5I5 2752 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 SETXQ7Z333 2677 aaKnown RBP18.54■□□□□ 0.56
PRKCB-209ENST00000498058 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 NPIPB15A6NHN6 443 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 H3BRJ5 948 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 CPP00450 1065 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 MYCLP1P12525 358 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 PNLIPP16233 465 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 KELP23276 732 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 AK4P27144 223 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 VIPR1P32241 457 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 ETV3P41162 512 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 ZNF135P52742 658 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 EIF3IQ13347 325 aaKnown RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 HGSNATQ68CP4 663 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 HEATR4Q86WZ0 1026 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 PAF1Q8N7H5 531 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 GPBAR1Q8TDU6 330 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 PDCD6IPQ8WUM4 868 aaKnown RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 DTD2Q96FN9 168 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 TMEM74Q96NL1 305 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 CCNL2Q96S94 520 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 DNAJC7Q99615 494 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 FRMD8Q9BZ67 464 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 STRADBQ9C0K7 418 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 SEMA6CQ9H3T2 930 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 CARS2Q9HA77 564 aaKnown RBP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 PCDH18Q9HCL0 1135 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.53■□□□□ 0.56
PRKCB-209ENST00000498058 ACSL6Q9UKU0 697 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 SCINQ9Y6U3 715 aa18.53■□□□□ 0.56
PRKCB-209ENST00000498058 TMX2-CTNND1H3BSU7 103 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 SOCS5O75159 536 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 FGF1P05230 155 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 CCNB1P14635 433 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 IL4RP24394 825 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 POLD2P49005 469 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 OR1D5P58170 312 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 ZNF235Q14590 738 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 C16orf72Q14CZ0 275 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 TMCO3Q6UWJ1 677 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 ZNF574Q6ZN55 896 aaPredicted RBP18.52■□□□□ 0.56
PRKCB-209ENST00000498058 Q6ZVL8 140 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 CPNE8Q86YQ8 564 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 PATE1Q8WXA2 126 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 PANX2Q96RD6 677 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 RDH14Q9HBH5 336 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 ABHD10Q9NUJ1 306 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 FOXJ2Q9P0K8 574 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 PHTF1Q9UMS5 762 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 PLEKHM1Q9Y4G2 1056 aa18.52■□□□□ 0.56
PRKCB-209ENST00000498058 PRAMEF33A0A0G2JMD5 474 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 PYCARD-AS1I3L0S3 204 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 NUDT21O43809 227 aaKnown RBP18.51■□□□□ 0.55
PRKCB-209ENST00000498058 NRDCO43847 1150 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 PRAMEF10O60809 474 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 SOD1P00441 154 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 PDHA1P08559 390 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 CD48P09326 243 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 CTPS1P17812 591 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 WT1P19544 449 aaPredicted RBP18.51■□□□□ 0.55
PRKCB-209ENST00000498058 HNRNPH3P31942 346 aaKnown RBP18.51■□□□□ 0.55
PRKCB-209ENST00000498058 ARL4AP40617 200 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 CDK3Q00526 305 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 SLC25A11Q02978 314 aaKnown RBP18.51■□□□□ 0.55
PRKCB-209ENST00000498058 MMRN1Q13201 1228 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 LINC00303Q3SY05 128 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 BOLA3Q53S33 107 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 TECPR1Q7Z6L1 1165 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 ZFAND4Q86XD8 727 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 EXD3Q8N9H8 876 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 PIH1D2Q8WWB5 315 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 THAP2Q9H0W7 228 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.51■□□□□ 0.55
PRKCB-209ENST00000498058 SUFUQ9UMX1 484 aa18.51■□□□□ 0.55
PRKCB-209ENST00000498058 ZFC3H1O60293 1989 aaKnown RBP18.51■□□□□ 0.55
PRKCB-209ENST00000498058 SDK2Q58EX2 2172 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 C9orf172C9J069 976 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 NVLO15381 856 aaKnown RBP18.5■□□□□ 0.55
PRKCB-209ENST00000498058 PGLSO95336 258 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 SERPING1P05155 500 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 PTMAP06454 111 aaKnown RBP18.5■□□□□ 0.55
PRKCB-209ENST00000498058 JMJD7P0C870 316 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 MYBL1P10243 752 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 HSPA9P38646 679 aaKnown RBP18.5■□□□□ 0.55
PRKCB-209ENST00000498058 GNPDA1P46926 289 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 ARHGEF7Q14155 803 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 ZNF438Q7Z4V0 828 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 NAGSQ8N159 534 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 TC2NQ8N9U0 490 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 ZDHHC1Q8WTX9 485 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 USP7Q93009 1102 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 SCRN2Q96FV2 425 aa18.5■□□□□ 0.55
PRKCB-209ENST00000498058 PDLIM2Q96JY6 352 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms