RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 ZC3H18Q86VM9 953 aaKnown RBP24.65■■□□□ 1.54
UPF3A-209ENST00000492270 HEATR4Q86WZ0 1026 aa24.65■■□□□ 1.54
UPF3A-209ENST00000492270 ATL2Q8NHH9 583 aa24.65■■□□□ 1.54
UPF3A-209ENST00000492270 TFB1MQ8WVM0 346 aaKnown RBP24.65■■□□□ 1.54
UPF3A-209ENST00000492270 IMP4Q96G21 291 aaKnown RBP24.65■■□□□ 1.54
UPF3A-209ENST00000492270 BOCQ9BWV1 1114 aa24.65■■□□□ 1.54
UPF3A-209ENST00000492270 GOLGA6AQ9NYA3 693 aa24.65■■□□□ 1.54
UPF3A-209ENST00000492270 ZMIZ1Q9ULJ6 1067 aa24.65■■□□□ 1.54
UPF3A-209ENST00000492270 DMXL2Q8TDJ6 3036 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 GRID2IPA4D2P6 1211 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 CLDN7O95471 211 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 HOXC4P09017 264 aaPredicted RBP24.64■■□□□ 1.54
UPF3A-209ENST00000492270 MYCLP1P12525 358 aaPredicted RBP24.64■■□□□ 1.54
UPF3A-209ENST00000492270 RPL26P61254 145 aaKnown RBP24.64■■□□□ 1.54
UPF3A-209ENST00000492270 PPP2R5EQ16537 467 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 TEX44Q53QW1 395 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 C6orf132Q5T0Z8 1188 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 GUSBP11Q6P575 273 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 KDELC2Q7Z4H8 507 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 NT5DC3Q86UY8 548 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 SLC35F3Q8IY50 421 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 FSTL5Q8N475 847 aaPredicted RBP24.64■■□□□ 1.54
UPF3A-209ENST00000492270 LRRC57Q8N9N7 239 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 SPATA22Q8NHS9 363 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 P3H4Q92791 437 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 TEX101Q9BY14 249 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 SLC25A51Q9H1U9 297 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 ABCG8Q9H221 673 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 KCTD5Q9NXV2 234 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 RPL26L1Q9UNX3 145 aaKnown RBP24.64■■□□□ 1.54
UPF3A-209ENST00000492270 PCDHA3Q9Y5H8 950 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 DGKBQ9Y6T7 804 aa24.64■■□□□ 1.54
UPF3A-209ENST00000492270 TMEM8BA6NDV4 472 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 MT-CYBP00156 380 aaPredicted RBP24.63■■□□□ 1.53
UPF3A-209ENST00000492270 SOD1P00441 154 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 TNFP01375 233 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 CAPNS1P04632 268 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 JUPP14923 745 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 ZNF30P17039 623 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 STC1P52823 247 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 WASHC5Q12768 1159 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 ELOCQ15369 112 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 PCSK7Q16549 785 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 BBS12Q6ZW61 710 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 BZW1Q7L1Q6 419 aaKnown RBP24.63■■□□□ 1.53
UPF3A-209ENST00000492270 IFI44Q8TCB0 444 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 KIAA1524Q8TCG1 905 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 PTCD2Q8WV60 388 aaKnown RBP24.63■■□□□ 1.53
UPF3A-209ENST00000492270 SCAMP4Q969E2 229 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 TRIB3Q96RU7 358 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 LYSMD1Q96S90 227 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 USP29Q9HBJ7 922 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 GLOD4Q9HC38 313 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 CYP4F12Q9HCS2 524 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 MOSPD1Q9UJG1 213 aa24.63■■□□□ 1.53
UPF3A-209ENST00000492270 ZZEF1O43149 2961 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 MACROD2A1Z1Q3 448 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 CPED1A4D0V7 1026 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 ANKRD66B4E2M5 251 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 KELP23276 732 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 CTNNA2P26232 953 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 DUSP3P51452 185 aaPredicted RBP24.62■■□□□ 1.53
UPF3A-209ENST00000492270 CDK3Q00526 305 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 DPTQ07507 201 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 TARDBPQ13148 414 aaKnown RBP eCLIP24.62■■□□□ 1.53
UPF3A-209ENST00000492270 AADACL2Q6P093 401 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 MDM1Q8TC05 714 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 ALG3Q92685 438 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 TADA1Q96BN2 335 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 AP2M1Q96CW1 435 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 CALR3Q96L12 384 aaKnown RBP24.62■■□□□ 1.53
UPF3A-209ENST00000492270 TEKT5Q96M29 485 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 QKIQ96PU8 341 aaKnown RBP eCLIP24.62■■□□□ 1.53
UPF3A-209ENST00000492270 AGAP2Q99490 1192 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 SUDS3Q9H7L9 328 aaPredicted RBP24.62■■□□□ 1.53
UPF3A-209ENST00000492270 PHPT1Q9NRX4 125 aaPredicted RBP24.62■■□□□ 1.53
UPF3A-209ENST00000492270 SIRPGQ9P1W8 387 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 DOLKQ9UPQ8 538 aa24.62■■□□□ 1.53
UPF3A-209ENST00000492270 C1orf232A0A0U1RR37 186 aa24.61■■□□□ 1.53
UPF3A-209ENST00000492270 PRSS38A1L453 326 aa24.61■■□□□ 1.53
UPF3A-209ENST00000492270 TRABD2BA6NFA1 517 aa24.61■■□□□ 1.53
UPF3A-209ENST00000492270 CD68P34810 354 aaPredicted RBP24.61■■□□□ 1.53
UPF3A-209ENST00000492270 EFL1Q7Z2Z2 1120 aaKnown RBP24.61■■□□□ 1.53
UPF3A-209ENST00000492270 MLPHQ9BV36 600 aaPredicted RBP24.61■■□□□ 1.53
UPF3A-209ENST00000492270 TMEM168Q9H0V1 697 aa24.61■■□□□ 1.53
UPF3A-209ENST00000492270 C10orf88Q9H8K7 445 aa24.61■■□□□ 1.53
UPF3A-209ENST00000492270 UBP1Q9NZI7 540 aa24.61■■□□□ 1.53
UPF3A-209ENST00000492270 DNPEPQ9ULA0 475 aa24.61■■□□□ 1.53
UPF3A-209ENST00000492270 CCDC66A2RUB6 948 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 F5H423 210 aaPredicted RBP24.6■■□□□ 1.53
UPF3A-209ENST00000492270 TNFRSF10CO14798 259 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 OPA1O60313 960 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 FUCA1P04066 466 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 CEACAM5P06731 702 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 PIRTP0C851 137 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 NFKB1P19838 968 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 TEAD1P28347 426 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 GPR1P46091 355 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 E2F1Q01094 437 aa24.6■■□□□ 1.53
UPF3A-209ENST00000492270 NR0B2Q15466 257 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms