RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 FXYD1O00168 92 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 PPEF2O14830 753 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 VTNP04004 478 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 MMP3P08254 477 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 AMHR2Q16671 573 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 KIF19Q2TAC6 998 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 TECRLQ5HYJ1 363 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 BROXQ5VW32 411 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 XAF1Q6GPH4 301 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 NAPEPLDQ6IQ20 393 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 BTLAQ7Z6A9 289 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 OR6J1Q8NGC5 347 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 CCDC126Q96EE4 140 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 TSPYL2Q9H2G4 693 aaPredicted RBP19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 GJD2Q9UKL4 321 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 TRHDEQ9UKU6 1024 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 NDUFAF1Q9Y375 327 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 FAM72CH0Y354 149 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 INPP4BO15327 924 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 KDM1AO60341 852 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 ACADSBP45954 432 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 YBX1P67809 324 aaKnown RBP19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 VPS26BQ4G0F5 336 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 MARCH8Q5T0T0 291 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 FAM72AQ5TYM5 149 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 FAM72DQ6L9T8 149 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 SLC2A7Q6PXP3 512 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 FAM72BQ86X60 149 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 SPNS2Q8IVW8 549 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 STARD8Q92502 1023 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 EMID1Q96A84 441 aaPredicted RBP19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 ZNF641Q96N77 438 aaPredicted RBP19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 BEGAINQ9BUH8 593 aa19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 INTS10Q9NVR2 710 aaKnown RBP19.35■□□□□ 0.69
SNAPC3-206ENST00000490969 DYTNA2CJ06 578 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 CLDN25C9JDP6 229 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 SYNCRIPO60506 623 aaKnown RBP19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 MTHFD1P11586 935 aaKnown RBP19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 CAPN3P20807 821 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 SLC6A2P23975 617 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 AXLP30530 894 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 ZNF846Q147U1 533 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 GTF2IRD2BQ6EKJ0 949 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 PKN3Q6P5Z2 889 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 GTF2IRD2Q86UP8 949 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 RNF135Q8IUD6 432 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 CADM3Q8N126 398 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 NPWQ8N729 165 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 SH3YL1Q96HL8 342 aaPredicted RBP19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 VWA7Q9Y334 891 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 ZFC3H1O60293 1989 aaKnown RBP19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 M0QYT0 321 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 UBFD1O14562 309 aaKnown RBP19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 ANGPT2O15123 496 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 SPTLC1O15269 473 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 ZNF865P0CJ78 1059 aaPredicted RBP19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 EEF1DP29692 281 aaKnown RBP19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 SLC1A2P43004 574 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 SLC26A2P50443 739 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 SLC12A2P55011 1212 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 DEPDC1Q5TB30 811 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 BTBD8Q5XKL5 378 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■■□□ 17.7
SNAPC3-206ENST00000490969 PHF21BQ96EK2 531 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 C3orf30Q96M34 536 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 MUS81Q96NY9 551 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 PSD2Q9BQI7 771 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 SHROOM3Q8TF72 1996 aa19.34■□□□□ 0.69
SNAPC3-206ENST00000490969 H0YAE9 185 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 AP3B1O00203 1094 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 NCAM2O15394 837 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 MTSS1O43312 755 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 MYL3P08590 195 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 ARF4P18085 180 aaPredicted RBP19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 GALNT1Q10472 559 aaPredicted RBP19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 FAM187BQ17R55 369 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 PCID2Q5JVF3 399 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 UNC93AQ86WB7 457 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 C19orf60Q96EN9 201 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 NFKBIZQ9BYH8 718 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 SLC27A5Q9Y2P5 690 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 ST14Q9Y5Y6 855 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 CITO14578 2027 aa19.33■□□□□ 0.69
SNAPC3-206ENST00000490969 ABCB7O75027 752 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 DAB1O75553 588 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 ALBP02768 609 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 PABPC1P11940 636 aaKnown RBP19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 ARNTP27540 789 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 HPCAL1P37235 193 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 ARCN1P48444 511 aaKnown RBP19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 TKTL1P51854 596 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 PERM1Q5SV97 790 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 RPL10LQ96L21 214 aaKnown RBP19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 HSFY1Q96LI6 401 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 TRIM8Q9BZR9 551 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 GSTO2Q9H4Y5 243 aa19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 TRIP12Q14669 1992 aaPredicted RBP19.33■□□□□ 0.68
SNAPC3-206ENST00000490969 TCRBV5S2A0A599 114 aa19.32■□□□□ 0.68
SNAPC3-206ENST00000490969 LDLRP01130 860 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms