RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 SNRNP25Q9BV90 132 aaKnown RBP16.95■□□□□ 0.3
TOP3B-217ENST00000489581 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 OCIAD1Q9NX40 245 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 GOLGA6AQ9NYA3 693 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 TMEM9Q9P0T7 183 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 PLEKHM1Q9Y4G2 1056 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 PCDHGA3Q9Y5H0 932 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 IGHV1OR21-1A0A087WYE8 117 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 HEXIM1O94992 359 aaKnown RBP16.94■□□□□ 0.3
TOP3B-217ENST00000489581 PSMA2P25787 234 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 VIPR1P32241 457 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 CSTF2P33240 577 aaKnown RBP eCLIP16.94■□□□□ 0.3
TOP3B-217ENST00000489581 ADCY8P40145 1251 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 ETV3P41162 512 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 RENBPP51606 427 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 POLE2P56282 527 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 SLC10A7Q0GE19 358 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 KCNAB2Q13303 367 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 LBRQ14739 615 aaKnown RBP16.94■□□□□ 0.3
TOP3B-217ENST00000489581 PTPRRQ15256 657 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 CT47A1Q5JQC4 288 aaPredicted RBP16.94■□□□□ 0.3
TOP3B-217ENST00000489581 CDKAL1Q5VV42 579 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 ACAD10Q6JQN1 1059 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 DOK6Q6PKX4 331 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 HSD11B1LQ7Z5J1 315 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 OR4D9Q8NGE8 314 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 ZNF564Q8TBZ8 553 aaPredicted RBP16.94■□□□□ 0.3
TOP3B-217ENST00000489581 DTD2Q96FN9 168 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 PSKH2Q96QS6 385 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 PEBP4Q96S96 227 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 CDH19Q9H159 772 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 SLC39A1Q9NY26 324 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 SEPT3Q9UH03 358 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 LRRK2Q5S007 2527 aa16.94■□□□□ 0.3
TOP3B-217ENST00000489581 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.93■□□□□ 0.3
TOP3B-217ENST00000489581 HTRA2O43464 458 aaPredicted RBP16.93■□□□□ 0.3
TOP3B-217ENST00000489581 CSF2RBP32927 897 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 ACTR1BP42025 376 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 ACTR1AP61163 376 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 PPP6R3Q5H9R7 873 aaPredicted RBP16.93■□□□□ 0.3
TOP3B-217ENST00000489581 TMCO4Q5TGY1 634 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 RAET1GQ6H3X3 334 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 Q6ZVL8 140 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 FAM129CQ86XR2 697 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 NRSN1Q8IZ57 195 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 CBARPQ8N350 705 aaPredicted RBP16.93■□□□□ 0.3
TOP3B-217ENST00000489581 ARFGAP1Q8N6T3 406 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 CCDC112Q8NEF3 446 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 EPN3Q9H201 632 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 KCNK4Q9NYG8 393 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 TAS2R14Q9NYV8 317 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 RELNP78509 3460 aa16.93■□□□□ 0.3
TOP3B-217ENST00000489581 TRBV23OR9-2A0A075B6M9 112 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 A0A0U1RQS6 177 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 EFCAB7A8K855 629 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 EIF3CLB5ME19 914 aaKnown RBP16.92■□□□□ 0.3
TOP3B-217ENST00000489581 ATMINO43313 823 aaPredicted RBP16.92■□□□□ 0.3
TOP3B-217ENST00000489581 RAD1O60671 282 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 CPP00450 1065 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 THRAP10827 490 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 LHCGRP22888 699 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 CCR10P46092 362 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 PPM1FP49593 454 aaPredicted RBP16.92■□□□□ 0.3
TOP3B-217ENST00000489581 COPB1P53618 953 aaKnown RBP16.92■□□□□ 0.3
TOP3B-217ENST00000489581 MAMLD1Q13495 774 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 ZNF235Q14590 738 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 ZNF761Q86XN6 746 aaPredicted RBP16.92■□□□□ 0.3
TOP3B-217ENST00000489581 EIF3CQ99613 913 aaKnown RBP16.92■□□□□ 0.3
TOP3B-217ENST00000489581 DDA1Q9BW61 102 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 ZMYND15Q9H091 742 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 FANCLQ9NW38 375 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 KCTD5Q9NXV2 234 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 ANKMY1Q9P2S6 941 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 PHTF1Q9UMS5 762 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 SLC17A4Q9Y2C5 497 aa16.92■□□□□ 0.3
TOP3B-217ENST00000489581 TMCO5BA8MYB1 307 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 IVLP07476 585 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 CYP2A6P11509 494 aaPredicted RBP16.91■□□□□ 0.3
TOP3B-217ENST00000489581 SQSTM1Q13501 440 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 IGFBP7Q16270 282 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 SNAP47Q5SQN1 464 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 DCAF12Q5T6F0 453 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 ANKS6Q68DC2 871 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 TMEM71Q6P5X7 295 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 CYP4V2Q6ZWL3 525 aaPredicted RBP16.91■□□□□ 0.3
TOP3B-217ENST00000489581 TSPAN33Q86UF1 283 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 PGBD5Q8N414 524 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 SPOCK2Q92563 424 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 NUDCD1Q96RS6 583 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 ASPSCR1Q9BZE9 553 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 TRIM7Q9C029 511 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 NOD2Q9HC29 1040 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 ZNF71Q9NQZ8 489 aaPredicted RBP16.91■□□□□ 0.3
TOP3B-217ENST00000489581 CWC15Q9P013 229 aaKnown RBP16.91■□□□□ 0.3
TOP3B-217ENST00000489581 TMEM98Q9Y2Y6 226 aa16.91■□□□□ 0.3
TOP3B-217ENST00000489581 A0A1W2PQ67 120 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 NPIPB15A6NHN6 443 aaPredicted RBP16.9■□□□□ 0.3
TOP3B-217ENST00000489581 ZNF891A8MT65 544 aaPredicted RBP16.9■□□□□ 0.3
TOP3B-217ENST00000489581 A8MU76 341 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 NKX2-8O15522 239 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms