RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PROX2Q3B8N5 592 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 ZCCHC8Q6NZY4 707 aaKnown RBP14.27□□□□□ -0.13
BRCA1-218ENST00000489037 KDELC2Q7Z4H8 507 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 GKN2Q86XP6 184 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 CDKL3Q8IVW4 592 aaPredicted RBP14.27□□□□□ -0.13
BRCA1-218ENST00000489037 NRSN1Q8IZ57 195 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 RBFAQ8N0V3 343 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 CBARPQ8N350 705 aaPredicted RBP14.27□□□□□ -0.13
BRCA1-218ENST00000489037 SDR16C5Q8N3Y7 309 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 TTC13Q8NBP0 860 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 FUBP1Q96AE4 644 aaKnown RBP14.27□□□□□ -0.13
BRCA1-218ENST00000489037 AP2M1Q96CW1 435 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 TOR4AQ9NXH8 423 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 PKD2L2Q9NZM6 624 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 KLF15Q9UIH9 416 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 MSRB2Q9Y3D2 182 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 LRP4O75096 1905 aa14.27□□□□□ -0.13
BRCA1-218ENST00000489037 ACACBO00763 2458 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 TNFRSF10CO14798 259 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 PMPCBO75439 489 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 CLDN7O95471 211 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 FTCDO95954 541 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 CCDC175P0C221 793 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 PYGMP11217 842 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 MYCLP1P12525 358 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-218ENST00000489037 GM2AP17900 193 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 ACP1P24666 158 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 TEAD1P28347 426 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 ACADVLP49748 655 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 STC1P52823 247 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 EIF3EP60228 445 aaKnown RBP14.26□□□□□ -0.13
BRCA1-218ENST00000489037 E2F1Q01094 437 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 OTUD4Q01804 1114 aaKnown RBP14.26□□□□□ -0.13
BRCA1-218ENST00000489037 PTSQ03393 145 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 DPTQ07507 201 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 GALNT3Q14435 633 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 IHHQ14623 411 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 NOMO1Q15155 1222 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 PTPRRQ15256 657 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 ALG11Q2TAA5 492 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 DEFB133Q30KQ1 61 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 ITPRIPL1Q6GPH6 555 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 DARS2Q6PI48 645 aaKnown RBP14.26□□□□□ -0.13
BRCA1-218ENST00000489037 DHRS13Q6UX07 377 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 ZNF765Q7L2R6 523 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 TECPR1Q7Z6L1 1165 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 NLRP8Q86W28 1048 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 LRRC8AQ8IWT6 810 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 FAM181AQ8N9Y4 354 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 ACTL9Q8TC94 416 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 APOLD1Q96LR9 279 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 LYSMD1Q96S90 227 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 ABCG8Q9H221 673 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 TCEAL2Q9H3H9 227 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-218ENST00000489037 FAM153AQ9UHL3 310 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 RSPH14Q9UHP6 348 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 CD84Q9UIB8 345 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 KLK13Q9UKR3 277 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 WASF3Q9UPY6 502 aa14.26□□□□□ -0.13
BRCA1-218ENST00000489037 ARHGEF17Q96PE2 2063 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-218ENST00000489037 RGSL1A5PLK6 1076 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 GOLGA6L3A6NEY3 463 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 TMEM202A6NGA9 273 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 LMO7DNF2Z398 122 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 DKK1O94907 266 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 NDST3O95803 873 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 MT-CYBP00156 380 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-218ENST00000489037 RBP3P10745 1247 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 CKMT1AP12532 417 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 NFKB1P19838 968 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 RBL1P28749 1068 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 WASHC5Q12768 1159 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 SEL1L2Q5TEA6 688 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 LVRNQ6Q4G3 990 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 TMPRSS7Q7RTY8 843 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 TMPRSS12Q86WS5 348 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 HEATR4Q86WZ0 1026 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 ZNF567Q8N184 647 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 SPATA22Q8NHS9 363 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 ALG3Q92685 438 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 LRRC45Q96CN5 670 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 CNTNAP3BQ96NU0 1288 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 ALS2CR12Q96Q35 445 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 SMIM14Q96QK8 99 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 FCRL5Q96RD9 977 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 LRRC61Q9BV99 259 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 TEX101Q9BY14 249 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 CNTNAP3Q9BZ76 1288 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 GPR63Q9BZJ6 419 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 GRPEL1Q9HAV7 217 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 ZFYVE1Q9HBF4 777 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 MAGEE1Q9HCI5 957 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 CYP4F12Q9HCS2 524 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 RAD18Q9NS91 495 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 UBP1Q9NZI7 540 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 PACSIN2Q9UNF0 486 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-218ENST00000489037 DGKBQ9Y6T7 804 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 PLXNB3Q9ULL4 1909 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 ASXL3Q9C0F0 2248 aa14.25□□□□□ -0.13
BRCA1-218ENST00000489037 MYLKQ15746 1914 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms