RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CYP4F12Q9HCS2 524 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 PHPT1Q9NRX4 125 aaPredicted RBP17.73■□□□□ 0.43
ITGB1-215ENST00000488494 KCTD5Q9NXV2 234 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 CD84Q9UIB8 345 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 MOSPD1Q9UJG1 213 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 GPR34Q9UPC5 381 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 ALG6Q9Y672 507 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 APC2O95996 2303 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 A0A0A6YYK5 440 aaPredicted RBP17.72■□□□□ 0.43
ITGB1-215ENST00000488494 PRSS38A1L453 326 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 EME2A4GXA9 379 aaPredicted RBP17.72■□□□□ 0.43
ITGB1-215ENST00000488494 NDUFA10O95299 355 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 PRLP01236 227 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 FECHP22830 423 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 RPL26P61254 145 aaKnown RBP17.72■□□□□ 0.43
ITGB1-215ENST00000488494 SKOR1P84550 965 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 CDK3Q00526 305 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 TAZQ16635 292 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 CDCP2Q5VXM1 449 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 KAZNQ674X7 775 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 TECPR1Q7Z6L1 1165 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 NAT6Q93015 286 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 DEPDC7Q96QD5 511 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 GULP1Q9UBP9 304 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 DNPEPQ9ULA0 475 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 RPL26L1Q9UNX3 145 aaKnown RBP17.72■□□□□ 0.43
ITGB1-215ENST00000488494 PCDHB1Q9Y5F3 818 aa17.72■□□□□ 0.43
ITGB1-215ENST00000488494 GOLGA4Q13439 2230 aaKnown RBP17.72■□□□□ 0.43
ITGB1-215ENST00000488494 RCCD1A6NED2 376 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 PDE2AO00408 941 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-215ENST00000488494 TNFRSF10CO14798 259 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 IPO7O95373 1038 aaKnown RBP17.71■□□□□ 0.43
ITGB1-215ENST00000488494 PECAM1P16284 738 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-215ENST00000488494 ZNF30P17039 623 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 TGM2P21980 687 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 STC1P52823 247 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 TFDP2Q14188 446 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 PRKD1Q15139 912 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-215ENST00000488494 LVRNQ6Q4G3 990 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 DAAM2Q86T65 1068 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 CCDC50Q8IVM0 306 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 KATNAL2Q8IYT4 538 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 CACTIN-AS1Q8N1I8 211 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 KRT35Q92764 455 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 AGAP3Q96P47 875 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 FRMD8Q9BZ67 464 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-215ENST00000488494 TMEM168Q9H0V1 697 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 SYNDIG1Q9H7V2 258 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 CARS2Q9HA77 564 aaKnown RBP17.71■□□□□ 0.43
ITGB1-215ENST00000488494 SAE1Q9UBE0 346 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-215ENST00000488494 PADI4Q9UM07 663 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 AK5Q9Y6K8 562 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 CELSR3Q9NYQ7 3312 aa17.71■□□□□ 0.43
ITGB1-215ENST00000488494 MYLKQ15746 1914 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 COL27A1Q8IZC6 1860 aaPredicted RBP17.7■□□□□ 0.42
ITGB1-215ENST00000488494 C1orf232A0A0U1RR37 186 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 B4DGG1 531 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 CST8O60676 142 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 CSO75390 466 aaKnown RBP17.7■□□□□ 0.42
ITGB1-215ENST00000488494 SOD1P00441 154 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 TEAD1P28347 426 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 PTSQ03393 145 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 DPTQ07507 201 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 GALNT3Q14435 633 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 TFDP3Q5H9I0 405 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 DOK6Q6PKX4 331 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 RAD9BQ6WBX8 426 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 TAF8Q7Z7C8 310 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 TMTC1Q8IUR5 882 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 SDR16C5Q8N3Y7 309 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 SCAMP4Q969E2 229 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 CCDC74AQ96AQ1 378 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 HAUS1Q96CS2 278 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 AP2M1Q96CW1 435 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 IMP4Q96G21 291 aaKnown RBP17.7■□□□□ 0.42
ITGB1-215ENST00000488494 NRSN2Q9GZP1 204 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 BRD8Q9H0E9 1235 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 ABCG8Q9H221 673 aa17.7■□□□□ 0.42
ITGB1-215ENST00000488494 REXO2Q9Y3B8 237 aaKnown RBP17.7■□□□□ 0.42
ITGB1-215ENST00000488494 EPN1Q9Y6I3 576 aaPredicted RBP17.7■□□□□ 0.42
ITGB1-215ENST00000488494 LAMA5O15230 3695 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 hCG_1818297A0A087WSY0 165 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 CASC3O15234 703 aaKnown RBP17.69■□□□□ 0.42
ITGB1-215ENST00000488494 CLDN7O95471 211 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 CEACAM5P06731 702 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 GPR1P46091 355 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 GNPDA1P46926 289 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 ADCY2Q08462 1091 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 RTP5Q14D33 572 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 PCSK7Q16549 785 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 QPCTQ16769 361 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 ADAMTSL4Q6UY14 1074 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 ZNF765Q7L2R6 523 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 TRIM74Q86UV6 250 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 ACRBPQ8NEB7 543 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 CCL4L1Q8NHW4 92 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 PTCD2Q8WV60 388 aaKnown RBP17.69■□□□□ 0.42
ITGB1-215ENST00000488494 RBM41Q96IZ5 413 aaKnown RBP17.69■□□□□ 0.42
ITGB1-215ENST00000488494 LYSMD1Q96S90 227 aa17.69■□□□□ 0.42
ITGB1-215ENST00000488494 CCDC3Q9BQI4 270 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms