RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CNTN1Q12860 1018 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 ILF2Q12905 390 aaKnown RBP6.96□□□□□ -1.3
UBR4-214ENST00000486515 MTAPQ13126 283 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 MTM1Q13496 603 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 QPCTQ16769 361 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 AARS2Q5JTZ9 985 aaKnown RBP6.96□□□□□ -1.3
UBR4-214ENST00000486515 SPANXN3Q5MJ09 141 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 CERCAMQ5T4B2 595 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 KIAA1161Q6NSJ0 714 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 MRNIPQ6NTE8 343 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 KIAA1211LQ6NV74 962 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 NEK5Q6P3R8 708 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 SLC36A4Q6YBV0 504 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 CAPN12Q6ZSI9 719 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 C3orf62Q6ZUJ4 267 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 PARS2Q7L3T8 475 aaKnown RBP6.96□□□□□ -1.3
UBR4-214ENST00000486515 TAOK1Q7L7X3 1001 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 FAM124AQ86V42 546 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 C11orf74Q86VG3 221 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 ANKMY2Q8IV38 441 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 CNPY4Q8N129 248 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
UBR4-214ENST00000486515 OR6P1Q8NGX9 317 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 GDAP1Q8TB36 358 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 PIH1D2Q8WWB5 315 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 EZH1Q92800 747 aaPredicted RBP6.96□□□□□ -1.3
UBR4-214ENST00000486515 PEX13Q92968 403 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 CLDN23Q96B33 292 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 TADA1Q96BN2 335 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 ZNF669Q96BR6 464 aaPredicted RBP6.96□□□□□ -1.3
UBR4-214ENST00000486515 ECHDC3Q96DC8 303 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 MRGPRX1Q96LB2 322 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 HHIPQ96QV1 700 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 FAM129BQ96TA1 746 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 EBNA1BP2Q99848 306 aaKnown RBP6.96□□□□□ -1.3
UBR4-214ENST00000486515 MKRN2Q9H000 416 aaKnown RBP6.96□□□□□ -1.3
UBR4-214ENST00000486515 EPC1Q9H2F5 836 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 SGK2Q9HBY8 427 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 PREBQ9HCU5 417 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 PCDH12Q9NPG4 1184 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 C20orf96Q9NUD7 363 aaPredicted RBP6.96□□□□□ -1.3
UBR4-214ENST00000486515 NSMCE4AQ9NXX6 385 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 B4GALT6Q9UBX8 382 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 SRPK3Q9UPE1 567 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 CHMP2BQ9UQN3 213 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 VPS9D1Q9Y2B5 631 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 ZNF711Q9Y462 761 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 TCAF1Q9Y4C2 921 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 RPS6KL1Q9Y6S9 549 aa6.96□□□□□ -1.3
UBR4-214ENST00000486515 MIA3Q5JRA6 1907 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 WDFY3Q8IZQ1 3526 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 A0A087WUV0 522 aaPredicted RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 FAM237BA0A1B0GVD1 139 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TSPAN11A1L157 253 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 CCDC78A2IDD5 438 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 PSMD11O00231 422 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 AXIN1O15169 862 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 CTIFO43310 598 aaKnown RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 AP1G1O43747 822 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 FZD6O60353 706 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TM7SF2O76062 418 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 PAPSS2O95340 614 aaPredicted RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 CLDN7O95471 211 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ACSL3O95573 720 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ALPIP09923 528 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ATXN1LP0C7T5 689 aaKnown RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 PIRTP0C851 137 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 RALBP11234 206 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 PLA2G2AP14555 144 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TIMP2P16035 220 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TSHRP16473 764 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 GABRG2P18507 467 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ITGALP20701 1170 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 CD6P30203 668 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 HMGCLP35914 325 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 NUDT1P36639 197 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 SPAM1P38567 509 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 GRIA1P42261 906 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 LIG3P49916 1009 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TPMTP51580 245 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 COPAP53621 1224 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TMPRSS15P98073 1019 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 GPS2Q13227 327 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 ITGA9Q13797 1035 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 LONRF1Q17RB8 773 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 KCTD19Q17RG1 926 aaPredicted RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 KLHL38Q2WGJ6 581 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 SETMARQ53H47 684 aaPredicted RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 FASTKD1Q53R41 847 aaKnown RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 ZRANB3Q5FWF4 1079 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 HP1BP3Q5SSJ5 553 aaPredicted RBP6.95□□□□□ -1.3
UBR4-214ENST00000486515 FNBP1LQ5T0N5 605 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 FAM182AQ5T1J6 154 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 TSTD2Q5T7W7 516 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 LGSNQ5TDP6 509 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 LYPLAL1Q5VWZ2 237 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 LRRC66Q68CR7 880 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 PDPK2PQ6A1A2 396 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 PKN3Q6P5Z2 889 aa6.95□□□□□ -1.3
UBR4-214ENST00000486515 AFTPHQ6ULP2 937 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms