RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RGSL1A5PLK6 1076 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 GOLGA8CPA6NN73 597 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 C10orf142B7Z368 130 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 TM7SF2O76062 418 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 ETV3P41162 512 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 SPINT3P49223 89 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 PPP2CBP62714 309 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 PPP2CAP67775 309 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 CREB5Q02930 508 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 SLMAPQ14BN4 828 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 ANKRD20A4Q4UJ75 823 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 TMEM259Q4ZIN3 620 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 ESRP1Q6NXG1 681 aaKnown RBP17.55■□□□□ 0.4
CHMP3-207ENST00000485465 CES3Q6UWW8 571 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 RFLNAQ6ZTI6 216 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 Q6ZVL8 140 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 TRIM69Q86WT6 500 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 MFSD3Q96ES6 412 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 DNAJC1Q96KC8 554 aaKnown RBP17.55■□□□□ 0.4
CHMP3-207ENST00000485465 TRIM56Q9BRZ2 755 aaKnown RBP17.55■□□□□ 0.4
CHMP3-207ENST00000485465 GPR174Q9BXC1 333 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 C1QTNF2Q9BXJ5 285 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 C6orf106Q9H6K1 298 aaPredicted RBP17.55■□□□□ 0.4
CHMP3-207ENST00000485465 TREX1Q9NSU2 369 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 ZC3H7BQ9UGR2 993 aaKnown RBP17.55■□□□□ 0.4
CHMP3-207ENST00000485465 COQ6Q9Y2Z9 468 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 RPS6KL1Q9Y6S9 549 aa17.55■□□□□ 0.4
CHMP3-207ENST00000485465 WNT9AO14904 365 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 NDUFS2O75306 463 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 RECQL5O94762 991 aaPredicted RBP17.54■□□□□ 0.4
CHMP3-207ENST00000485465 USP1O94782 785 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 TTC4O95801 387 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 POLBP06746 335 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 BPIP17213 487 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 HADHAP40939 763 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 CCR5P51681 352 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 NUBP1P53384 320 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 TMPRSS15P98073 1019 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 ACVR1Q04771 509 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 ZNF284Q2VY69 593 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 ZNF528Q3MIS6 628 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 KIAA0895LQ68EN5 471 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 SLC36A4Q6YBV0 504 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 CYP2U1Q7Z449 544 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 NRSN1Q8IZ57 195 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 OR13J1Q8NGT2 312 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 NELL1Q92832 810 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 ZNF669Q96BR6 464 aaPredicted RBP17.54■□□□□ 0.4
CHMP3-207ENST00000485465 DTD2Q96FN9 168 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 CFAP36Q96G28 342 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 C9orf72Q96LT7 481 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 FCRL3Q96P31 734 aaPredicted RBP17.54■□□□□ 0.4
CHMP3-207ENST00000485465 C1QTNF1Q9BXJ1 281 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 FAM126AQ9BYI3 521 aaPredicted RBP17.54■□□□□ 0.4
CHMP3-207ENST00000485465 RAD18Q9NS91 495 aa17.54■□□□□ 0.4
CHMP3-207ENST00000485465 MYLKQ15746 1914 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 CCL22O00626 93 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 RPP40O75818 363 aaKnown RBP17.53■□□□□ 0.4
CHMP3-207ENST00000485465 MAT2AP31153 395 aaKnown RBP17.53■□□□□ 0.4
CHMP3-207ENST00000485465 ARSDP51689 593 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 PTPN5P54829 565 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 SGCGQ13326 291 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 FGL2Q14314 439 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 AGERQ15109 404 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 ANGPT1Q15389 498 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 SPANXN3Q5MJ09 141 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 ZDHHC20Q5W0Z9 365 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 STEAP4Q687X5 459 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 UNC5AQ6ZN44 842 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 PALM2Q8IXS6 379 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 GPR26Q8NDV2 337 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 AENQ8WTP8 325 aaKnown RBP17.53■□□□□ 0.4
CHMP3-207ENST00000485465 ASB12Q8WXK4 309 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 KLK6Q92876 244 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 CDKN2AIPNLQ96HQ2 116 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 TBATAQ96M53 351 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 SLC17A9Q9BYT1 436 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 TXLNGYQ9BZA5 131 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 PCED1AQ9H1Q7 454 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 ABCG8Q9H221 673 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 FAM83DQ9H4H8 585 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 PLAC1Q9HBJ0 212 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 KCTD5Q9NXV2 234 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 CD84Q9UIB8 345 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 FKBPLQ9UIM3 349 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 FAM169AQ9Y6X4 670 aa17.53■□□□□ 0.4
CHMP3-207ENST00000485465 ZCWPW2A0A1B0GU75 182 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 MAP3K13O43283 966 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 LATO43561 262 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 GALR2O43603 387 aaPredicted RBP17.52■□□□□ 0.4
CHMP3-207ENST00000485465 PAK4O96013 591 aaPredicted RBP17.52■□□□□ 0.4
CHMP3-207ENST00000485465 SP9P0CG40 484 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 PAMP19021 973 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 BCKDHBP21953 392 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 SPAM1P38567 509 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 DCDC1P59894 354 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 RPL6Q02878 288 aaKnown RBP17.52■□□□□ 0.4
CHMP3-207ENST00000485465 CRYMQ14894 314 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 KIAA0930Q6ICG6 404 aaPredicted RBP17.52■□□□□ 0.4
CHMP3-207ENST00000485465 EMBQ6PCB8 327 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms