RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 GP1BAP07359 652 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 GOLGA6DP0CG33 693 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 MYCLP1P12525 358 aaPredicted RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 ZNF30P17039 623 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 TGM2P21980 687 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 CA4P22748 312 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 KELP23276 732 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 CDC25BP30305 580 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 NR2C2P49116 596 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 RPL26P61254 145 aaKnown RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 PRKD1Q15139 912 aaPredicted RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 NR0B2Q15466 257 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 RAET1GQ6H3X3 334 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 GUSBP11Q6P575 273 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 KDELC2Q7Z4H8 507 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 HEATR4Q86WZ0 1026 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 CCDC50Q8IVM0 306 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 PDCD7Q8N8D1 485 aaKnown RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 EXD1Q8NHP7 514 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 IFI44Q8TCB0 444 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 SCAMP4Q969E2 229 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 IMP4Q96G21 291 aaKnown RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 ABCG8Q9H221 673 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 CCDC86Q9H6F5 360 aaKnown RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 CYP4F12Q9HCS2 524 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 GOLGA6AQ9NYA3 693 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 NCKIPSDQ9NZQ3 722 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 RPL26L1Q9UNX3 145 aaKnown RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 DOLKQ9UPQ8 538 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 COL27A1Q8IZC6 1860 aaPredicted RBP12.88□□□□□ -0.35
HDAC1-209ENST00000484305 FREM2Q5SZK8 3169 aa12.88□□□□□ -0.35
HDAC1-209ENST00000484305 APC2O95996 2303 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 PRSS38A1L453 326 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 EME2A4GXA9 379 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 SRRM3A6NNA2 597 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 BTNL10A8MVZ5 291 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 ANKRD66B4E2M5 251 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 PJA2O43164 708 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 MT-CO3P00414 261 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 SOD1P00441 154 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 PTPN3P26045 913 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 CTNNA1P35221 906 aaKnown RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 VAV2P52735 878 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 STC1P52823 247 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 NAP1L1P55209 391 aaKnown RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 CDK3Q00526 305 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 DPTQ07507 201 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 CYP4F3Q08477 520 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 GALNT3Q14435 633 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 QPCTQ16769 361 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 TEX44Q53QW1 395 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 PERM1Q5SV97 790 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 LVRNQ6Q4G3 990 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 BZW1Q7L1Q6 419 aaKnown RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 EFL1Q7Z2Z2 1120 aaKnown RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 ZC3H18Q86VM9 953 aaKnown RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 PROSER1Q86XN7 944 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 CACTIN-AS1Q8N1I8 211 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 DCBLD1Q8N8Z6 715 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 SPATA22Q8NHS9 363 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 TFB1MQ8WVM0 346 aaKnown RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 SCG3Q8WXD2 468 aaKnown RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 P3H4Q92791 437 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 TADA1Q96BN2 335 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 HAUS1Q96CS2 278 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 RBM41Q96IZ5 413 aaKnown RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 TRIB3Q96RU7 358 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 LYSMD1Q96S90 227 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 HEMGNQ9BXL5 484 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 TMEM168Q9H0V1 697 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 SLC25A51Q9H1U9 297 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 PHPT1Q9NRX4 125 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-209ENST00000484305 EVA1BQ9NVM1 165 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 SIRPGQ9P1W8 387 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 IMPACTQ9P2X3 320 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 MOSPD1Q9UJG1 213 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 GPR34Q9UPC5 381 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 CLCA2Q9UQC9 943 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 ACACAQ13085 2346 aa12.87□□□□□ -0.35
HDAC1-209ENST00000484305 A0A0U1RQJ8 604 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 C1orf232A0A0U1RR37 186 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 PDE2AO00408 941 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 CASC3O15234 703 aaKnown RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 CEACAM5P06731 702 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 TEAD1P28347 426 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 CD68P34810 354 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 GPR1P46091 355 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 POLD2P49005 469 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 PCSK7Q16549 785 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 CDCP2Q5VXM1 449 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 BBS12Q6ZW61 710 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 TAF8Q7Z7C8 310 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 GKN2Q86XP6 184 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 SDR16C5Q8N3Y7 309 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms