RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 SPECC1LQ69YQ0 1117 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 ALG1LQ6GMV1 187 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 RAET1GQ6H3X3 334 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 TIGD7Q6NT04 549 aaPredicted RBP9.42□□□□□ -0.9
NUP50-215ENST00000484186 CLEC14AQ86T13 490 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 TSPAN33Q86UF1 283 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 HEATR4Q86WZ0 1026 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 NRROSQ86YC3 692 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 CPNE8Q86YQ8 564 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 Q8N9G6 341 aaPredicted RBP9.42□□□□□ -0.9
NUP50-215ENST00000484186 KIAA1524Q8TCG1 905 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 GPBAR1Q8TDU6 330 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 CTNNBL1Q8WYA6 563 aaPredicted RBP9.42□□□□□ -0.9
NUP50-215ENST00000484186 SLC39A7Q92504 469 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 FATE1Q969F0 183 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 CCDC97Q96F63 343 aaPredicted RBP9.42□□□□□ -0.9
NUP50-215ENST00000484186 TMEM74Q96NL1 305 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 TSGA13Q96PP4 275 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 ZNF670Q9BS34 389 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 FRMD8Q9BZ67 464 aaPredicted RBP9.42□□□□□ -0.9
NUP50-215ENST00000484186 STRADBQ9C0K7 418 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 CARS2Q9HA77 564 aaKnown RBP9.42□□□□□ -0.9
NUP50-215ENST00000484186 EPB41L5Q9HCM4 733 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 SPATS2LQ9NUQ6 558 aaKnown RBP9.42□□□□□ -0.9
NUP50-215ENST00000484186 HAUS2Q9NVX0 235 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 RBM22Q9NW64 420 aaKnown RBP eCLIP9.42□□□□□ -0.9
NUP50-215ENST00000484186 TRNAU1APQ9NX07 287 aaKnown RBP9.42□□□□□ -0.9
NUP50-215ENST00000484186 LRIT1Q9P2V4 623 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 AMACRQ9UHK6 382 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 RNF215Q9Y6U7 377 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 LRP4O75096 1905 aa9.42□□□□□ -0.9
NUP50-215ENST00000484186 SHROOM3Q8TF72 1996 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 A0A0J9YYE9 177 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 A0A0U1RQS6 177 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 GOLGA6CA6NDK9 693 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 GOLGA6BA6NDN3 693 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 PLD2O14939 933 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 NUDT21O43809 227 aaKnown RBP9.41□□□□□ -0.9
NUP50-215ENST00000484186 MAP3K6O95382 1288 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 TRBC1P01850 177 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 FGF1P05230 155 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ITGA2BP08514 1039 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 GOLGA6DP0CG33 693 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ZNF30P17039 623 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 MX2P20592 715 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 CCKBRP32239 447 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 UGT1A5P35504 534 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 GPR1P46091 355 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 GNPDA1P46926 289 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 EPHB1P54762 984 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 TMPRSS3P57727 454 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 B4GALNT1Q00973 533 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 DSC2Q02487 901 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 PTSQ03393 145 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ILF3Q12906 894 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUP50-215ENST00000484186 EIF3IQ13347 325 aaKnown RBP9.41□□□□□ -0.9
NUP50-215ENST00000484186 IHHQ14623 411 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ASTE1Q2TB18 679 aaPredicted RBP9.41□□□□□ -0.9
NUP50-215ENST00000484186 ZSCAN23Q3MJ62 389 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ARHGAP40Q5TG30 622 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 RAB11FIP2Q7L804 512 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 B3GNT8Q7Z7M8 397 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 NLRP8Q86W28 1048 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 CCNJLQ8IV13 435 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 SFTPA2Q8IWL1 248 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 FBXO39Q8N4B4 442 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUP50-215ENST00000484186 PQLC3Q8N755 202 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 OR8K1Q8NGG5 319 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ZDHHC1Q8WTX9 485 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 FAF2Q96CS3 445 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 PACSIN1Q9BY11 444 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 GSDMCQ9BYG8 508 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 FOXP3Q9BZS1 431 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ABCG8Q9H221 673 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 DEF6Q9H4E7 631 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 SUDS3Q9H7L9 328 aaPredicted RBP9.41□□□□□ -0.9
NUP50-215ENST00000484186 CPNE5Q9HCH3 593 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 GOLGA6AQ9NYA3 693 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 CD84Q9UIB8 345 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 ATXN7L1Q9ULK2 861 aaPredicted RBP9.41□□□□□ -0.9
NUP50-215ENST00000484186 SUFUQ9UMX1 484 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 CHKBQ9Y259 395 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 SLC17A4Q9Y2C5 497 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
NUP50-215ENST00000484186 PTPRQQ9UMZ3 2332 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 IGSF10Q6WRI0 2623 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 SSU72P8A0A1W2PR75 194 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 CBFA2T2O43439 604 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 B4GAT1O43505 415 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 PRLP01236 227 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 PYGLP06737 847 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 IVLP07476 585 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 TMEM253P0C7T8 217 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 CA4P22748 312 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 KDELR1P24390 212 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 AK4P27144 223 aaPredicted RBP9.4□□□□□ -0.9
NUP50-215ENST00000484186 MAN1A1P33908 653 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 ADCY8P40145 1251 aa9.4□□□□□ -0.9
NUP50-215ENST00000484186 POLD2P49005 469 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms